Co-expression analysis

Gene ID PtpAffx.151469.1.S1_at
Gene name hypothetical protein
Homology with ArabidopsisSimilar to At2g13650: GONST1 (Golgi Nucleotide Sugar Transporter 1) (HF=7e-34)
Module size 6 genes
NF 0.12
%ile 24.2

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.5380.50.93PtpAffx.151469.1.S1_atDN494849hypothetical protein-7e-34At2g13650GONST1 (Golgi Nucleotide Sugar Transporter 1)O.I.H.G.S.X.
0.3661.60.94PtpAffx.30368.2.S1_s_atCX657356hypothetical protein-2e-3At3g51730saposin B domain-containing proteinO.I.H.G.S.X.
0.1525.30.94PtpAffx.3718.1.A1_atCX167706hypothetical protein-6e-31At5g63620oxidoreductase, zinc-binding dehydrogenase family proteinO.I.H.G.S.X.
0.0914.60.93PtpAffx.217108.1.S1_atpmrna32250hypothetical protein-8e-13At5g03330OTU-like cysteine protease family proteinO.I.H.G.S.X.
0.0914.60.94PtpAffx.210556.1.S1_s_atpmrna20710hypothetical protein-5e-1At3g04630WDL1O.I.H.G.S.X.
0.0711.60.93PtpAffx.13718.1.S1_atBU896942hypothetical protein-7e-1At5g43100aspartyl protease family proteinO.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
5.697.2GSM328281Populus x canescens root control_rep_02GSE13109Effect of hypoxia on gene expression in Grey poplarLink to GEO
3.293.5GSM327380Populus balsamifera_20071015_Etiolated_seedling_6d_transfered_to_light_3h_1GSE13990Populus balsamifera developmental tissue seriesLink to GEO
3.293.5GSM372094Clone3200_LPI5_N+_4w_rep2GSE14893Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 3200Link to GEO
3.092.9GSM327404Populus balsamifera_1006_young_leaf_midday_1GSE13990Populus balsamifera developmental tissue seriesLink to GEO
2.389.8GSM328285Populus x canescens root control_rep_04GSE13109Effect of hypoxia on gene expression in Grey poplarLink to GEO
2.389.8GSM372091Clone3200_LPI2_N-_4w_rep1GSE14893Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 3200Link to GEO
2.289.3GSM136936Poplar in 1 x hrp + 0.25 % sucrose no bacteriaGSE5887Pseudomonas aeruginosa PAO1 virulent genes in the poplar rhizosphereLink to GEO
2.289.3GSM328534Populus x canescens root control_rep_07GSE13109Effect of hypoxia on gene expression in Grey poplarLink to GEO
2.188.6GSM328561Populus x canescens root control_rep_12GSE13109Effect of hypoxia on gene expression in Grey poplarLink to GEO
2.188.6GSM334226Populus balsamifera_1006_mature_leaf_midday_3GSE13990Populus balsamifera developmental tissue seriesLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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