Co-expression analysis

Gene ID	PtpAffx.151469.1.S1_at
Gene name	hypothetical protein
Homology with Arabidopsis	Similar to At2g13650: GONST1 (Golgi Nucleotide Sugar Transporter 1) (HF=7e-34)
Module size	6 genes
NF	0.12
%ile	24.2

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.53	80.5	0.93	PtpAffx.151469.1.S1_at	DN494849	hypothetical protein	-	7e-34	At2g13650	GONST1 (Golgi Nucleotide Sugar Transporter 1)	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)
0.36	61.6	0.94	PtpAffx.30368.2.S1_s_at	CX657356	hypothetical protein	-	2e-3	At3g51730	saposin B domain-containing protein	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)
0.15	25.3	0.94	PtpAffx.3718.1.A1_at	CX167706	hypothetical protein	-	6e-31	At5g63620	oxidoreductase, zinc-binding dehydrogenase family protein	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)
0.09	14.6	0.93	PtpAffx.217108.1.S1_at	pmrna32250	hypothetical protein	-	8e-13	At5g03330	OTU-like cysteine protease family protein	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)
0.09	14.6	0.94	PtpAffx.210556.1.S1_s_at	pmrna20710	hypothetical protein	-	5e-1	At3g04630	WDL1	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)
0.07	11.6	0.93	PtpAffx.13718.1.S1_at	BU896942	hypothetical protein	-	7e-1	At5g43100	aspartyl protease family protein	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
5.6	97.2	GSM328281	Populus x canescens root control_rep_02	GSE13109	Effect of hypoxia on gene expression in Grey poplar
3.2	93.5	GSM327380	Populus balsamifera_20071015_Etiolated_seedling_6d_transfered_to_light_3h_1	GSE13990	Populus balsamifera developmental tissue series
3.2	93.5	GSM372094	Clone3200_LPI5_N+_4w_rep2	GSE14893	Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 3200
3.0	92.9	GSM327404	Populus balsamifera_1006_young_leaf_midday_1	GSE13990	Populus balsamifera developmental tissue series
2.3	89.8	GSM328285	Populus x canescens root control_rep_04	GSE13109	Effect of hypoxia on gene expression in Grey poplar
2.3	89.8	GSM372091	Clone3200_LPI2_N-_4w_rep1	GSE14893	Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 3200
2.2	89.3	GSM136936	Poplar in 1 x hrp + 0.25 % sucrose no bacteria	GSE5887	Pseudomonas aeruginosa PAO1 virulent genes in the poplar rhizosphere
2.2	89.3	GSM328534	Populus x canescens root control_rep_07	GSE13109	Effect of hypoxia on gene expression in Grey poplar
2.1	88.6	GSM328561	Populus x canescens root control_rep_12	GSE13109	Effect of hypoxia on gene expression in Grey poplar
2.1	88.6	GSM334226	Populus balsamifera_1006_mature_leaf_midday_3	GSE13990	Populus balsamifera developmental tissue series

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Triticum_aestivum

Vitis_vinifera

Zea_mays

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