Co-expression analysis

Gene ID PtpAffx.149907.1.S1_at
Gene name anthranilate synthase, alpha subunit 2
Homology with ArabidopsisSimilar to At2g29690: ASA2 (ANTHRANILATE SYNTHASE 2) (HF=9e-25)
Module size 6 genes
NF 0.24
%ile 44.5

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.5683.90.92PtpAffx.149907.1.S1_atDN486564anthranilate synthase, alpha subunit 2-9e-25At2g29690ASA2 (ANTHRANILATE SYNTHASE 2)O.I.H.G.S.X.
0.3357.50.92PtpAffx.63422.2.S1_atCV245230hypothetical protein-2e-1Atmg00285-O.I.H.G.S.X.
0.3357.50.93PtpAffx.3757.3.A1_a_atCV243561hypothetical protein-4e-20At1g76090SMT3 (STEROL METHYLTRANSFERASE 3)O.I.H.G.S.X.
0.2543.60.94Ptp.5836.1.S1_atBU836398hypothetical protein-9e-1At4g12510protease inhibitor/seed storage/lipid transfer protein (LTP) family proteinO.I.H.G.S.X.
0.2034.60.92Ptp.7842.1.A1_atDN497632hypothetical protein-3e-30At4g21460unknown proteinO.I.H.G.S.X.
0.1016.30.92Ptp.1259.1.S1_s_atBU809321hypothetical protein-1e-4At1g79930HSP91O.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
6.397.7GSM372097Clone3200_LPI5_N-_8w_rep1GSE14893Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 3200Link to GEO
4.295.6GSM372098Clone3200_LPI5_N-_8w_rep2GSE14893Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 3200Link to GEO
3.092.9GSM327411Populus balsamifera_1006_differentiating_xylem_midday_1GSE13990Populus balsamifera developmental tissue seriesLink to GEO
2.691.3GSM327408Populus balsamifera_1006_root_midday_2GSE13990Populus balsamifera developmental tissue seriesLink to GEO
2.289.3GSM328274Populus x canescens leaf hypoxia_rep_02GSE13109Effect of hypoxia on gene expression in Grey poplarLink to GEO
2.188.6GSM328059Populus x canescens leaf control_rep_01GSE13109Effect of hypoxia on gene expression in Grey poplarLink to GEO
2.088.0GSM328062Populus x canescens leaf control_rep_02GSE13109Effect of hypoxia on gene expression in Grey poplarLink to GEO
1.987.2GSM327405Populus balsamifera_1006_young_leaf_midday_2GSE13990Populus balsamifera developmental tissue seriesLink to GEO
1.886.4GSM328562Populus x canescens root hypoxia_rep_04GSE13109Effect of hypoxia on gene expression in Grey poplarLink to GEO
1.886.4GSM328063Populus x canescens leaf control_rep_03GSE13109Effect of hypoxia on gene expression in Grey poplarLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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