Co-expression analysis

Gene ID PtpAffx.148459.1.S1_at
Gene name hypothetical protein
Homology with ArabidopsisSimilar to At5g49900: catalytic/ glucosylceramidase (HF=7e-24)
Module size 11 genes
NF 0.20
%ile 37.2

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.5178.90.89PtpAffx.148459.1.S1_atBU895346hypothetical protein-7e-24At5g49900catalytic/ glucosylceramidaseO.I.H.G.S.X.
0.5380.50.94PtpAffx.209407.1.S1_atpmrna18634hypothetical protein-2e-39At2g38970zinc finger (C3HC4-type RING finger) family proteinO.I.H.G.S.X.
0.4572.30.89PtpAffx.55272.1.S1_atBP927962--5e-9At3g58050unknown proteinO.I.H.G.S.X.
0.3559.70.92PtpAffx.206196.1.S1_atpmrna12304hypothetical protein-4e-19At2g19090unknown proteinO.I.H.G.S.X.
0.3357.50.91PtpAffx.128202.1.A1_atBP931352type-b response regulator-1e+0At3g22540unknown proteinO.I.H.G.S.X.
0.3153.70.91Ptp.355.1.A1_atCK088544hypothetical protein-1e-13At1g74770protein binding / zinc ion bindingO.I.H.G.S.X.
0.2340.50.94PtpAffx.212425.1.S1_atpmrna24339hypothetical protein-5e-20At2g42400VOZ2 (VASCULAR PLANT ONE ZINC FINGER PROTEIN 2)O.I.H.G.S.X.
0.2136.50.92PtpAffx.221194.1.S1_x_atpmrna37884hypothetical protein-1e-2At5g42830transferase family proteinO.I.H.G.S.X.
0.2034.60.92PtpAffx.21027.1.A1_atBP931070hypothetical protein-1e-7At1g15080LPP2 (LIPID PHOSPHATE PHOSPHATASE 2)O.I.H.G.S.X.
0.1016.30.91PtpAffx.49841.1.A1_atCV243029hypothetical protein-9e-24At2g24260basic helix-loop-helix (bHLH) family proteinO.I.H.G.S.X.
0.069.80.91Ptp.6741.2.S1_a_atCF232857hypothetical protein-4e-1At5g18270ANAC087O.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
4.295.6GSM327661Populus balsamifera_Male_Catkin_midday_3GSE13990Populus balsamifera developmental tissue seriesLink to GEO
3.594.3GSM327404Populus balsamifera_1006_young_leaf_midday_1GSE13990Populus balsamifera developmental tissue seriesLink to GEO
2.389.8GSM362889Clone1979_LPI5_N-_4w_rep1GSE14515Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 1979Link to GEO
2.289.3GSM327403Populus balsamifera_20071015_Etiolated_seedling_6d_3GSE13990Populus balsamifera developmental tissue seriesLink to GEO
2.289.3GSM327406Populus balsamifera_1006_young_leaf_midday_3GSE13990Populus balsamifera developmental tissue seriesLink to GEO
2.188.6GSM372096Clone3200_LPI5_N-_4w_rep2GSE14893Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 3200Link to GEO
1.987.2GSM327380Populus balsamifera_20071015_Etiolated_seedling_6d_transfered_to_light_3h_1GSE13990Populus balsamifera developmental tissue seriesLink to GEO
1.987.2GSM327656Populus balsamifera_Female_Catkin_midday_1GSE13990Populus balsamifera developmental tissue seriesLink to GEO
1.684.5GSM327405Populus balsamifera_1006_young_leaf_midday_2GSE13990Populus balsamifera developmental tissue seriesLink to GEO
1.684.5GSM334225Populus balsamifera_1006_mature_leaf_midday_2GSE13990Populus balsamifera developmental tissue seriesLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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