Co-expression analysis

Gene ID	PtpAffx.147241.1.A1_s_at
Gene name	hypothetical protein
Homology with Arabidopsis	Similar to At5g51650: unknown protein (HF=2e+0)
Module size	6 genes
NF	0.62
%ile	92.0

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.91	99.2	0.94	PtpAffx.147241.1.A1_s_at	CV244318	hypothetical protein	-	2e+0	At5g51650	unknown protein	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)
0.63	88.1	0.92	Ptp.2463.1.S1_s_at	CV257616	hypothetical protein	-	3e-2	At3g04720	PR4 (PATHOGENESIS-RELATED 4)	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)
0.53	80.5	0.92	Ptp.2463.1.S1_a_at	CV257616	hypothetical protein	-	3e-2	At3g04720	PR4 (PATHOGENESIS-RELATED 4)	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)
0.44	71.9	0.94	PtpAffx.213451.1.S1_at	pmrna26301	hypothetical protein	-	7e-1	At4g07786	unknown protein	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)
0.44	71.9	0.94	PtpAffx.131802.1.S1_at	DN501815	hypothetical protein	-	2e-5	At3g01650	RGLG1 (RING domain Ligase1)	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)
0.40	67.0	0.93	PtpAffx.42700.1.A1_at	BP934666	hypothetical protein	-	5e+0	At4g03050	AOP3	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
5.1	96.8	GSM327659	Populus balsamifera_Male_Catkin_midday_1	GSE13990	Populus balsamifera developmental tissue series
3.1	93.2	GSM327405	Populus balsamifera_1006_young_leaf_midday_2	GSE13990	Populus balsamifera developmental tissue series
2.9	92.5	GSM327656	Populus balsamifera_Female_Catkin_midday_1	GSE13990	Populus balsamifera developmental tissue series
2.6	91.3	GSM327658	Populus balsamifera_Female_Catkin_midday_3	GSE13990	Populus balsamifera developmental tissue series
2.3	89.8	GSM327660	Populus balsamifera_Male_Catkin_midday_2	GSE13990	Populus balsamifera developmental tissue series
2.2	89.3	GSM244432	non infected tissue, biological rep3	GSE9673	Comparative transcriptomic reveals signatures specific to various interactions with Melampsora rust fungi
2.1	88.6	GSM328281	Populus x canescens root control_rep_02	GSE13109	Effect of hypoxia on gene expression in Grey poplar
2.1	88.6	GSM327661	Populus balsamifera_Male_Catkin_midday_3	GSE13990	Populus balsamifera developmental tissue series
2.0	88.0	GSM244436	Mmd infected tissue, biological rep1	GSE9673	Comparative transcriptomic reveals signatures specific to various interactions with Melampsora rust fungi
1.8	86.4	GSM244434	Mlp infected tissue, biological rep2	GSE9673	Comparative transcriptomic reveals signatures specific to various interactions with Melampsora rust fungi

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Triticum_aestivum

Vitis_vinifera

Zea_mays

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