Co-expression analysis

Gene ID PtpAffx.147163.1.A1_at
Gene name hypothetical protein
Homology with ArabidopsisSimilar to At4g23260: ATP binding / protein kinase/ protein serine/threonine kinase/ protein tyrosine kinase (HF=4e-1)
Module size 17 genes
NF 0.37
%ile 63.5

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.6187.00.83PtpAffx.147163.1.A1_atCV267314hypothetical protein-4e-1At4g23260ATP binding / protein kinase/ protein serine/threonine kinase/ protein tyrosine kinaseO.I.H.G.S.X.
0.5279.40.88PtpAffx.160.1.A1_atCV271753--5e-2At4g35510unknown proteinO.I.H.G.S.X.
0.5078.60.86PtpAffx.100032.1.A1_atBP934526--3e-1At3g20960CYP705A33O.I.H.G.S.X.
0.4875.40.89PtpAffx.158291.1.A1_s_atBP931571hypothetical protein-3e+0At5g65320basic helix-loop-helix (bHLH) family proteinO.I.H.G.S.X.
0.4471.90.88PtpAffx.209672.1.S1_atpmrna19089hypothetical protein-9e-30At1g62400HT1 (high leaf temperature 1)O.I.H.G.S.X.
0.4067.00.88PtpAffx.35533.1.S1_atCV258042NAC domain protein, IPR003441-2e+0At5g38100methyltransferase-relatedO.I.H.G.S.X.
0.4067.00.88PtpAffx.145.1.A1_atCV269750hypothetical protein-2e-3At1g33700catalytic/ glucosylceramidaseO.I.H.G.S.X.
0.3964.60.88PtpAffx.107969.1.A1_atCV265199--3e-2At5g66680DGL1O.I.H.G.S.X.
0.3863.70.87PtpAffx.127135.1.A1_atCV270237rna-dependent RNA polymerase-3e+0At5g28590DNA-binding protein-relatedO.I.H.G.S.X.
0.3559.70.90PtpAffx.219237.1.S1_atpmrna35094multidrug resistance protein ABC transporter family-2e-12At1g30410ATMRP13O.I.H.G.S.X.
0.3255.20.88PtpAffx.96558.1.A1_atCV258453SAUR family protein-2e+0At2g34390NIP2O.I.H.G.S.X.
0.3255.20.90PtpAffx.5537.1.A1_atCV244540--2e+0At5g07600oleosin / glycine-rich proteinO.I.H.G.S.X.
0.3153.70.89PtpAffx.217375.1.S1_atpmrna32606hypothetical protein-6e-1At2g33740CUTAO.I.H.G.S.X.
0.2850.50.86PtpAffx.225775.1.S1_atpmrna45365hypothetical protein-9e-2At5g01020protein kinase family proteinO.I.H.G.S.X.
0.2850.50.88PtpAffx.38961.1.S1_atAB030083.1hypothetical protein-2e-2At4g23180CRK10 (CYSTEINE-RICH RLK10)O.I.H.G.S.X.
0.2543.60.87PtpAffx.84833.1.S1_atCV241171hypothetical protein-2e-1At1g60710ATB2O.I.H.G.S.X.
0.2238.30.83PtpAffx.158291.1.A1_atBP931571--3e+0At5g65320basic helix-loop-helix (bHLH) family proteinO.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
4.596.1GSM327404Populus balsamifera_1006_young_leaf_midday_1GSE13990Populus balsamifera developmental tissue seriesLink to GEO
4.596.1GSM327409Populus balsamifera_1006_root_midday_3GSE13990Populus balsamifera developmental tissue seriesLink to GEO
2.992.5GSM327408Populus balsamifera_1006_root_midday_2GSE13990Populus balsamifera developmental tissue seriesLink to GEO
2.389.8GSM327407Populus balsamifera_1006_root_midday_1GSE13990Populus balsamifera developmental tissue seriesLink to GEO
2.289.3GSM327402Populus balsamifera_20071015_Etiolated_seedling_6d_2GSE13990Populus balsamifera developmental tissue seriesLink to GEO
2.289.3GSM327658Populus balsamifera_Female_Catkin_midday_3GSE13990Populus balsamifera developmental tissue seriesLink to GEO
2.289.3GSM327657Populus balsamifera_Female_Catkin_midday_2GSE13990Populus balsamifera developmental tissue seriesLink to GEO
1.886.4GSM362885Clone1979_LPI2_N-_4w_rep1GSE14515Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 1979Link to GEO
1.684.5GSM362886Clone1979_LPI2_N-_4w_rep2GSE14515Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 1979Link to GEO
1.482.3GSM372095Clone3200_LPI5_N-_4w_rep1GSE14893Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 3200Link to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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