Co-expression analysis

Gene ID PtpAffx.145419.1.S1_at
Gene name hypothetical protein
Homology with ArabidopsisSimilar to At5g02290: NAK (HF=5e-13)
Module size 6 genes
NF 0.40
%ile 68.1

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.5582.20.94PtpAffx.145419.1.S1_atDN499425hypothetical protein-5e-13At5g02290NAKO.I.H.G.S.X.
0.6791.10.94PtpAffx.31736.1.S1_s_atCX186616--4e-28At5g13080WRKY75O.I.H.G.S.X.
0.4471.90.93PtpAffx.204972.1.S1_atpmrna9834hypothetical protein-4e-1At5g16486-O.I.H.G.S.X.
0.2747.10.95Ptp.3685.1.S1_atCV264598hypothetical protein-3e-29At5g13080WRKY75O.I.H.G.S.X.
0.2543.60.95PtpAffx.64674.1.S1_s_atCV255442hypothetical protein-5e-2At1g05420OFP12 (OVATE FAMILY PROTEIN 12)O.I.H.G.S.X.
0.2340.50.94Ptp.5141.1.A1_atCV267910hypothetical protein-3e-8At2g03510band 7 family proteinO.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
3.594.3GSM327402Populus balsamifera_20071015_Etiolated_seedling_6d_2GSE13990Populus balsamifera developmental tissue seriesLink to GEO
3.494.0GSM327660Populus balsamifera_Male_Catkin_midday_2GSE13990Populus balsamifera developmental tissue seriesLink to GEO
2.992.5GSM327400Populus balsamifera_20071015_Etiolated_seedling_6d_1GSE13990Populus balsamifera developmental tissue seriesLink to GEO
2.691.3GSM327397Populus balsamifera_20071015_Etiolated_seedling_6d_transfered_to_light_3h_2GSE13990Populus balsamifera developmental tissue seriesLink to GEO
2.691.3GSM327398Populus balsamifera_20071015_Etiolated_seedling_6d_transfered_to_light_3h_3GSE13990Populus balsamifera developmental tissue seriesLink to GEO
2.590.9GSM244441Mixed infected tissue, biological rep3GSE9673Comparative transcriptomic reveals signatures specific to various interactions with Melampsora rust fungiLink to GEO
2.590.9GSM327380Populus balsamifera_20071015_Etiolated_seedling_6d_transfered_to_light_3h_1GSE13990Populus balsamifera developmental tissue seriesLink to GEO
2.389.8GSM327359Populus balsamifera_20071015_Seedling_continuous_light_6d_3GSE13990Populus balsamifera developmental tissue seriesLink to GEO
2.188.6GSM327403Populus balsamifera_20071015_Etiolated_seedling_6d_3GSE13990Populus balsamifera developmental tissue seriesLink to GEO
1.987.2GSM327407Populus balsamifera_1006_root_midday_1GSE13990Populus balsamifera developmental tissue seriesLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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