Co-expression analysis

Gene ID	PtpAffx.144812.1.S1_at
Gene name	hypothetical protein
Homology with Arabidopsis	Similar to At3g04630: WDL1 (HF=1e+0)
Module size	7 genes
NF	0.49
%ile	79.5

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.46	73.7	0.92	PtpAffx.144812.1.S1_at	DN500920	hypothetical protein	-	1e+0	At3g04630	WDL1	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)
0.67	91.1	0.93	PtpAffx.25673.1.S1_at	CA823367	hypothetical protein	-	5e-3	At2g18750	calmodulin-binding protein	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)
0.60	86.0	0.95	PtpAffx.206424.1.S1_x_at	pmrna12759	hypothetical protein	-	8e-9	At3g52400	SYP122 (SYNTAXIN OF PLANTS 122)	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)
0.60	86.0	0.96	PtpAffx.206424.1.S1_at	pmrna12759	hypothetical protein	-	8e-9	At3g52400	SYP122 (SYNTAXIN OF PLANTS 122)	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)
0.46	73.7	0.95	PtpAffx.136410.1.S1_at	CF936887	-	-	5e-1	At3g55880	unknown protein	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)
0.36	61.6	0.95	PtpAffx.7249.1.S1_at	BI124548	hypothetical protein	-	9e-2	At2g26530	AR781	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)
0.29	50.5	0.95	PtpAffx.201784.1.S1_at	pmrna3559	hypothetical protein	-	6e-7	At5g42440	protein kinase family protein	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
6.8	98.0	GSM327404	Populus balsamifera_1006_young_leaf_midday_1	GSE13990	Populus balsamifera developmental tissue series
2.9	92.5	GSM327408	Populus balsamifera_1006_root_midday_2	GSE13990	Populus balsamifera developmental tissue series
2.9	92.5	GSM372093	Clone3200_LPI5_N+_4w_rep1	GSE14893	Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 3200
2.6	91.3	GSM327412	Populus balsamifera_1006_differentiating_xylem_midday_2	GSE13990	Populus balsamifera developmental tissue series
2.2	89.3	GSM136938	Poplar contacted with P. aeruginosa PAO1 in 1 x hrp + 0.25 % sucrose	GSE5887	Pseudomonas aeruginosa PAO1 virulent genes in the poplar rhizosphere
2.0	88.0	GSM327409	Populus balsamifera_1006_root_midday_3	GSE13990	Populus balsamifera developmental tissue series
1.9	87.2	GSM362886	Clone1979_LPI2_N-_4w_rep2	GSE14515	Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 1979
1.8	86.4	GSM334226	Populus balsamifera_1006_mature_leaf_midday_3	GSE13990	Populus balsamifera developmental tissue series
1.7	85.5	GSM362885	Clone1979_LPI2_N-_4w_rep1	GSE14515	Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 1979
1.7	85.5	GSM362889	Clone1979_LPI5_N-_4w_rep1	GSE14515	Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 1979

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Triticum_aestivum

Vitis_vinifera

Zea_mays

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