Co-expression analysis

Gene ID PtpAffx.14376.1.A1_at
Gene name hypothetical protein
Homology with ArabidopsisSimilar to At5g26030: FC1 (ferrochelatase 1) (HF=1e-29)
Module size 6 genes
NF 0.20
%ile 38.1

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.6086.00.93PtpAffx.14376.1.A1_atCV264912hypothetical protein-1e-29At5g26030FC1 (ferrochelatase 1)O.I.H.G.S.X.
0.5078.60.93PtpAffx.46278.1.S1_atCK318821--2e-14At1g28510-O.I.H.G.S.X.
0.2136.50.93PtpAffx.207740.1.S1_atpmrna15383hypothetical protein-9e-92At3g11320organic anion transmembrane transporterO.I.H.G.S.X.
0.1932.70.94PtpAffx.15637.1.S1_atCV232239hypothetical protein-1e-101At2g47510FUM1 (FUMARASE 1)O.I.H.G.S.X.
0.1219.60.93PtpAffx.18716.3.S1_a_atCX660292hypothetical protein-3e-32At4g09720Ras-related GTP-binding protein, putativeO.I.H.G.S.X.
0.1219.60.93PtpAffx.5724.2.S1_s_atCV281733porin/voltage-dependent anion-selective channel protein-2e-19At5g57490VDAC4 (VOLTAGE DEPENDENT ANION CHANNEL 4)O.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
5.497.0GSM327661Populus balsamifera_Male_Catkin_midday_3GSE13990Populus balsamifera developmental tissue seriesLink to GEO
3.694.5GSM327404Populus balsamifera_1006_young_leaf_midday_1GSE13990Populus balsamifera developmental tissue seriesLink to GEO
2.590.9GSM372045Clone1979_LPI5_N+_8w_rep2GSE14515Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 1979Link to GEO
2.389.8GSM372044Clone1979_LPI5_N+_8w_rep1GSE14515Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 1979Link to GEO
2.389.8GSM327659Populus balsamifera_Male_Catkin_midday_1GSE13990Populus balsamifera developmental tissue seriesLink to GEO
1.987.2GSM334225Populus balsamifera_1006_mature_leaf_midday_2GSE13990Populus balsamifera developmental tissue seriesLink to GEO
1.684.5GSM328063Populus x canescens leaf control_rep_03GSE13109Effect of hypoxia on gene expression in Grey poplarLink to GEO
1.684.5GSM362890Clone1979_LPI5_N-_4w_rep2GSE14515Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 1979Link to GEO
1.583.5GSM327405Populus balsamifera_1006_young_leaf_midday_2GSE13990Populus balsamifera developmental tissue seriesLink to GEO
1.482.3GSM327658Populus balsamifera_Female_Catkin_midday_3GSE13990Populus balsamifera developmental tissue seriesLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Triticum_aestivum
Vitis_vinifera
Zea_mays



Back to the CoP portal site

Back to the KAGIANA project homepage