Co-expression analysis

Gene ID PtpAffx.141519.1.S1_at
Gene name hypothetical protein
Homology with ArabidopsisSimilar to At5g64070: PI-4KBETA1 (PHOSPHATIDYLINOSITOL 4-OH KINASE BETA1) (HF=2e-120)
Module size 6 genes
NF 0.41
%ile 69.6

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.5683.90.96PtpAffx.141519.1.S1_atAJ774599hypothetical protein-2e-120At5g64070PI-4KBETA1 (PHOSPHATIDYLINOSITOL 4-OH KINASE BETA1)O.I.H.G.S.X.
0.6187.00.96Ptp.4771.1.S1_atBU893475hypothetical protein-1e-10At4g19670zinc finger (C3HC4-type RING finger) family proteinO.I.H.G.S.X.
0.6086.00.96PtpAffx.215067.1.S1_atpmrna29028hypothetical protein-3e-5At2g21120unknown proteinO.I.H.G.S.X.
0.3052.00.96PtpAffx.23095.1.S1_atCX177404hypothetical protein-1e-3At3g02540RAD23-3 (PUTATIVE DNA REPAIR PROTEIN RAD23-3)O.I.H.G.S.X.
0.2543.60.96PtpAffx.84497.1.S1_s_atCF231611hypothetical protein-9e-17At3g18140transducin family protein / WD-40 repeat family proteinO.I.H.G.S.X.
0.2543.60.96PtpAffx.93043.1.S1_atCX178086hypothetical protein-4e-4At1g29800phosphoinositide binding / zinc ion bindingO.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
5.597.1GSM328532Populus x canescens root hypoxia_rep_02GSE13109Effect of hypoxia on gene expression in Grey poplarLink to GEO
4.295.6GSM328533Populus x canescens root hypoxia_rep_03GSE13109Effect of hypoxia on gene expression in Grey poplarLink to GEO
4.095.3GSM328564Populus x canescens root hypoxia_rep_06GSE13109Effect of hypoxia on gene expression in Grey poplarLink to GEO
3.494.0GSM328484Populus x canescens root hypoxia_rep_01GSE13109Effect of hypoxia on gene expression in Grey poplarLink to GEO
3.393.7GSM328567Populus x canescens root hypoxia_rep_09GSE13109Effect of hypoxia on gene expression in Grey poplarLink to GEO
3.393.7GSM328562Populus x canescens root hypoxia_rep_04GSE13109Effect of hypoxia on gene expression in Grey poplarLink to GEO
2.892.1GSM328565Populus x canescens root hypoxia_rep_07GSE13109Effect of hypoxia on gene expression in Grey poplarLink to GEO
2.490.4GSM136938Poplar contacted with P. aeruginosa PAO1 in 1 x hrp + 0.25 % sucroseGSE5887Pseudomonas aeruginosa PAO1 virulent genes in the poplar rhizosphereLink to GEO
2.088.0GSM328559Populus x canescens root control_rep_10GSE13109Effect of hypoxia on gene expression in Grey poplarLink to GEO
2.088.0GSM328560Populus x canescens root control_rep_11GSE13109Effect of hypoxia on gene expression in Grey poplarLink to GEO

Inter-species module comparison

A co-expression module including the rice gene, Os11g0209700, orthologous to the query gene, PtpAffx.141519.1.S1_at

VF%ileGene IDRepr. IDGene NameFunc.EvAGI codeArabidopsis gene nameO.I.H.G.S.X.Other DB
0.8696.4Os11g0209700At5g64070-Phosphatidylinositol 4-kinase (EC 2.7.1.67)4e-6At5g64070PI-4KBETA1 (PHOSPHATIDYLINOSITOL 4-OH KINASE BETA1)O.I.H.G.S.X.
0.4458.1Os06g0670000At5g64070-Molybdenum cofactor sulfurase1e+0At2g32487unknown proteinO.I.H.G.S.X.
0.2422.4Os02g0782200At5g64070-NOT2/NOT3/NOT5 family protein6e-9At1g07705transcription regulatorO.I.H.G.S.X.
0.1813.7Os08g0337300At5g64070-FYVE/PHD zinc finger domain containing protein1e-6At5g55390EDM2O.I.H.G.S.X.
0.1611.3Os05g0595500At5g64070-Pleckstrin-homology-related domain containingprotein6e-1At3g17170RFC3 (REGULATOR OF FATTY-ACID COMPOSITION 3)O.I.H.G.S.X.
0.127.2Os02g0124700At5g64070-Zn-finger, RING domain containing protein3e-1At1g73325trypsin and protease inhibitor family protein / Kunitz family proteinO.I.H.G.S.X.
0.052.5Os02g0786000At5g64070-Protein of unknown function DUF1339 family protein3e-8At5g28350-O.I.H.G.S.X.

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Triticum_aestivum
Vitis_vinifera
Zea_mays



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