Co-expression analysis

Gene ID PtpAffx.137981.1.S1_at
Gene name hypothetical protein
Homology with ArabidopsisSimilar to At3g48000: ALDH2B4 (ALDEHYDE DEHYDROGENASE 2B4) (HF=7e-34)
Module size 6 genes
NF 0.45
%ile 74.8

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.7192.60.94PtpAffx.137981.1.S1_atCF119982hypothetical protein-7e-34At3g48000ALDH2B4 (ALDEHYDE DEHYDROGENASE 2B4)O.I.H.G.S.X.
0.6791.10.94PtpAffx.137981.1.S1_a_atCF119982hypothetical protein-7e-34At3g48000ALDH2B4 (ALDEHYDE DEHYDROGENASE 2B4)O.I.H.G.S.X.
0.4875.40.94PtpAffx.22869.2.A1_atDN484123hypothetical protein-3e-28At4g08920CRY1 (CRYPTOCHROME 1)O.I.H.G.S.X.
0.3863.70.94PtpAffx.5557.1.S1_atCX186468hypothetical protein-5e-32At4g08920CRY1 (CRYPTOCHROME 1)O.I.H.G.S.X.
0.3559.70.94PtpAffx.73710.1.S1_atCX180923white-brown-complex ABC transporter family-4e-22At2g01320ABC transporter family proteinO.I.H.G.S.X.
0.2850.50.94PtpAffx.55625.2.S1_a_atBU837418hypothetical protein-2e-21At3g01920yrdC family proteinO.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
6.097.5GSM327411Populus balsamifera_1006_differentiating_xylem_midday_1GSE13990Populus balsamifera developmental tissue seriesLink to GEO
5.096.6GSM327412Populus balsamifera_1006_differentiating_xylem_midday_2GSE13990Populus balsamifera developmental tissue seriesLink to GEO
4.195.5GSM327660Populus balsamifera_Male_Catkin_midday_2GSE13990Populus balsamifera developmental tissue seriesLink to GEO
4.095.3GSM372095Clone3200_LPI5_N-_4w_rep1GSE14893Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 3200Link to GEO
3.894.9GSM327413Populus balsamifera_1006_differentiating_xylem_midday_3GSE13990Populus balsamifera developmental tissue seriesLink to GEO
2.691.3GSM244430non infected tissue, biological rep1GSE9673Comparative transcriptomic reveals signatures specific to various interactions with Melampsora rust fungiLink to GEO
2.490.4GSM244431non infected tissue, biological rep2GSE9673Comparative transcriptomic reveals signatures specific to various interactions with Melampsora rust fungiLink to GEO
2.490.4GSM244432non infected tissue, biological rep3GSE9673Comparative transcriptomic reveals signatures specific to various interactions with Melampsora rust fungiLink to GEO
2.289.3GSM244435Mlp infected tissue, biological rep3GSE9673Comparative transcriptomic reveals signatures specific to various interactions with Melampsora rust fungiLink to GEO
2.289.3GSM372042Clone1979_LPI5_N-_8w_rep1GSE14515Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 1979Link to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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