Co-expression analysis

Gene ID	PtpAffx.136323.2.S1_at
Gene name	glycosyltransferase, CAZy family GT8
Homology with Arabidopsis	Similar to At1g19300: PARVUS (PARVUS) (HF=1e-16)
Module size	6 genes
NF	0.65
%ile	93.3

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.91	99.2	0.94	PtpAffx.136323.2.S1_at	DN500699	glycosyltransferase, CAZy family GT8	-	1e-16	At1g19300	PARVUS (PARVUS)	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)
0.80	96.0	0.95	Ptp.7426.1.A1_at	CV267312	hypothetical protein	-	5e-4	At1g20850	XCP2 (xylem cysteine peptidase 2)	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)
0.60	86.0	0.95	PtpAffx.134559.1.A1_at	CV231309	-	-	3e-3	At1g22540	proton-dependent oligopeptide transport (POT) family protein	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)
0.60	86.0	0.95	Ptp.1349.1.A1_at	CK093602	hypothetical protein	-	2e-6	At4g10160	zinc finger (C3HC4-type RING finger) family protein	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)
0.55	82.2	0.94	PtpAffx.16149.1.S1_at	DN496951	folylpolyglutamate synthase	-	2e-1	At3g10160	DFC (DHFS-FPGS HOMOLOG C)	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)
0.25	43.6	0.96	Ptp.7757.1.S1_at	DN499447	-	-	4e-1	At5g24500	unknown protein	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
6.8	98.0	GSM328062	Populus x canescens leaf control_rep_02	GSE13109	Effect of hypoxia on gene expression in Grey poplar
4.5	96.1	GSM328105	Populus x canescens leaf hypoxia_rep_01	GSE13109	Effect of hypoxia on gene expression in Grey poplar
4.2	95.6	GSM327412	Populus balsamifera_1006_differentiating_xylem_midday_2	GSE13990	Populus balsamifera developmental tissue series
4.1	95.5	GSM327411	Populus balsamifera_1006_differentiating_xylem_midday_1	GSE13990	Populus balsamifera developmental tissue series
3.4	94.0	GSM328567	Populus x canescens root hypoxia_rep_09	GSE13109	Effect of hypoxia on gene expression in Grey poplar
2.8	92.1	GSM327656	Populus balsamifera_Female_Catkin_midday_1	GSE13990	Populus balsamifera developmental tissue series
2.7	91.8	GSM328564	Populus x canescens root hypoxia_rep_06	GSE13109	Effect of hypoxia on gene expression in Grey poplar
2.7	91.8	GSM327413	Populus balsamifera_1006_differentiating_xylem_midday_3	GSE13990	Populus balsamifera developmental tissue series
2.6	91.3	GSM327658	Populus balsamifera_Female_Catkin_midday_3	GSE13990	Populus balsamifera developmental tissue series
2.4	90.4	GSM327657	Populus balsamifera_Female_Catkin_midday_2	GSE13990	Populus balsamifera developmental tissue series

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Triticum_aestivum

Vitis_vinifera

Zea_mays

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