Co-expression analysis

Gene ID PtpAffx.133870.1.A1_at
Gene name cytochrome P450
Homology with ArabidopsisSimilar to At2g28370: - (HF=6e-1)
Module size 7 genes
NF 0.10
%ile 20.6

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.7794.90.88PtpAffx.133870.1.A1_atCV258749cytochrome P450-6e-1At2g28370-O.I.H.G.S.X.
0.5582.20.90PtpAffx.14587.1.A1_atCV263687hypothetical protein-7e-11At2g30400OFP2 (OVATE FAMILY PROTEIN 2)O.I.H.G.S.X.
0.1932.70.89PtpAffx.204194.1.S1_atpmrna8256hypothetical protein-4e-1At3g46613RTFL4 (ROTUNDIFOLIA LIKE 4)O.I.H.G.S.X.
0.1423.50.91PtpAffx.26568.1.A1_atCK091509hypothetical protein-2e-22At1g22860unknown proteinO.I.H.G.S.X.
0.1016.30.89PtpAffx.212809.1.S1_atpmrna25069hypothetical protein-7e-2At1g12970leucine-rich repeat family proteinO.I.H.G.S.X.
0.058.30.90PtpAffx.206801.1.S1_atpmrna13501hypothetical protein-1e-6At4g32190centromeric protein-relatedO.I.H.G.S.X.
0.046.90.89PtpAffx.212281.1.S1_atpmrna24076hypothetical protein-3e-7At5g16470zinc finger (C2H2 type) family proteinO.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
6.297.6GSM327659Populus balsamifera_Male_Catkin_midday_1GSE13990Populus balsamifera developmental tissue seriesLink to GEO
5.296.8GSM327656Populus balsamifera_Female_Catkin_midday_1GSE13990Populus balsamifera developmental tissue seriesLink to GEO
3.092.9GSM362888Clone1979_LPI5_N+_4w_rep2GSE14515Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 1979Link to GEO
2.992.5GSM372096Clone3200_LPI5_N-_4w_rep2GSE14893Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 3200Link to GEO
2.490.4GSM327404Populus balsamifera_1006_young_leaf_midday_1GSE13990Populus balsamifera developmental tissue seriesLink to GEO
2.389.8GSM327411Populus balsamifera_1006_differentiating_xylem_midday_1GSE13990Populus balsamifera developmental tissue seriesLink to GEO
2.289.3GSM327657Populus balsamifera_Female_Catkin_midday_2GSE13990Populus balsamifera developmental tissue seriesLink to GEO
1.987.2GSM327660Populus balsamifera_Male_Catkin_midday_2GSE13990Populus balsamifera developmental tissue seriesLink to GEO
1.785.5GSM327661Populus balsamifera_Male_Catkin_midday_3GSE13990Populus balsamifera developmental tissue seriesLink to GEO
1.684.5GSM328292Populus x canescens root control_rep_05GSE13109Effect of hypoxia on gene expression in Grey poplarLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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