Co-expression analysis

Gene ID PtpAffx.128825.2.S1_a_at
Gene name hypothetical protein
Homology with ArabidopsisSimilar to At5g67270: ATEB1C (microtubule end binding protein 1) (HF=4e-7)
Module size 12 genes
NF 0.73
%ile 97.3

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.7393.60.94PtpAffx.128825.2.S1_a_atCK096703hypothetical protein-4e-7At5g67270ATEB1C (microtubule end binding protein 1)O.I.H.G.S.X.
0.8296.30.93PtpAffx.2265.10.A1_a_atCV246443hypothetical protein-2e-4At1g20693HMGB2 (HIGH MOBILITY GROUP B 2)O.I.H.G.S.X.
0.8196.10.94PtpAffx.86796.1.A1_atDN490220hypothetical protein-1e-14At2g26180IQD6 (IQ-domain 6)O.I.H.G.S.X.
0.7794.90.94Ptp.6857.2.S1_s_atCA923790hypothetical protein-1e-1At4g35620CYCB2O.I.H.G.S.X.
0.7694.30.94PtpAffx.210026.1.S1_atpmrna19760hypothetical protein-1e-4At4g38070bHLH family proteinO.I.H.G.S.X.
0.6991.50.94Ptp.4412.2.S1_s_atCV237391hypothetical protein-1e-57At2g25880AtAUR2 (AtAurora2)O.I.H.G.S.X.
0.6791.10.94Ptp.759.1.S1_atCV259673tubulin alpha-7 chain-1e-82At4g14960TUA6O.I.H.G.S.X.
0.6791.10.94PtpAffx.201265.1.S1_atpmrna2509hypothetical protein-5e-7At3g20150kinesin motor family proteinO.I.H.G.S.X.
0.6791.10.94Ptp.6857.1.S1_s_atBU833205hypothetical protein-6e-9At1g20590cyclin, putativeO.I.H.G.S.X.
0.6791.10.95PtpAffx.200879.1.S1_atpmrna1723hypothetical protein-2e-6At2g26760CYCB1O.I.H.G.S.X.
0.6287.20.94PtpAffx.71284.1.S1_atBU837413hypothetical protein-4e-1At5g47220ERF2 (ETHYLENE RESPONSIVE ELEMENT BINDING FACTOR 2)O.I.H.G.S.X.
0.6187.00.94PtpAffx.202854.1.S1_s_atpmrna5645hypothetical protein-3e-12At1g17480IQD7 (IQ-domain 7)O.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
3.894.9GSM327660Populus balsamifera_Male_Catkin_midday_2GSE13990Populus balsamifera developmental tissue seriesLink to GEO
3.594.3GSM327405Populus balsamifera_1006_young_leaf_midday_2GSE13990Populus balsamifera developmental tissue seriesLink to GEO
3.494.0GSM327661Populus balsamifera_Male_Catkin_midday_3GSE13990Populus balsamifera developmental tissue seriesLink to GEO
3.092.9GSM327659Populus balsamifera_Male_Catkin_midday_1GSE13990Populus balsamifera developmental tissue seriesLink to GEO
2.992.5GSM334224Populus balsamifera_1006_mature_leaf_midday_1GSE13990Populus balsamifera developmental tissue seriesLink to GEO
2.892.1GSM327656Populus balsamifera_Female_Catkin_midday_1GSE13990Populus balsamifera developmental tissue seriesLink to GEO
2.691.3GSM327404Populus balsamifera_1006_young_leaf_midday_1GSE13990Populus balsamifera developmental tissue seriesLink to GEO
2.590.9GSM328566Populus x canescens root hypoxia_rep_08GSE13109Effect of hypoxia on gene expression in Grey poplarLink to GEO
2.490.4GSM328563Populus x canescens root hypoxia_rep_05GSE13109Effect of hypoxia on gene expression in Grey poplarLink to GEO
2.188.6GSM327658Populus balsamifera_Female_Catkin_midday_3GSE13990Populus balsamifera developmental tissue seriesLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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