Co-expression analysis

Gene ID PtpAffx.127059.1.A1_at
Gene name hypothetical protein
Homology with ArabidopsisSimilar to At1g66270: BGLU21 (HF=1e-4)
Module size 6 genes
NF 0.76
%ile 98.2

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.9199.20.94PtpAffx.127059.1.A1_atCV258719hypothetical protein-1e-4At1g66270BGLU21O.I.H.G.S.X.
0.8096.00.93PtpAffx.209537.1.S1_atpmrna18896hypothetical protein-1e+0At3g59250F-box family proteinO.I.H.G.S.X.
0.8096.00.95PtpAffx.200185.1.S1_atpmrna342hypothetical protein-8e-4At2g44450BGLU15 (BETA GLUCOSIDASE 15)O.I.H.G.S.X.
0.7393.60.92PtpAffx.162331.1.S1_atCA821362--1e+0At4g11640ATSR (ARABIDOPSIS THALIANA SERINE RACEMASE)O.I.H.G.S.X.
0.5078.60.96PtpAffx.212416.1.S1_atpmrna24321hypothetical protein-5e-1At2g43350ATGPX3 (GLUTATHIONE PEROXIDASE 3)O.I.H.G.S.X.
0.3661.60.96PtpAffx.200185.1.S1_s_atpmrna342hypothetical protein-8e-4At2g44450BGLU15 (BETA GLUCOSIDASE 15)O.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
14.899.5GSM327409Populus balsamifera_1006_root_midday_3GSE13990Populus balsamifera developmental tissue seriesLink to GEO
5.196.8GSM328567Populus x canescens root hypoxia_rep_09GSE13109Effect of hypoxia on gene expression in Grey poplarLink to GEO
4.195.5GSM328564Populus x canescens root hypoxia_rep_06GSE13109Effect of hypoxia on gene expression in Grey poplarLink to GEO
3.193.2GSM372091Clone3200_LPI2_N-_4w_rep1GSE14893Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 3200Link to GEO
2.590.9GSM372092Clone3200_LPI2_N-_4w_rep2GSE14893Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 3200Link to GEO
2.389.8GSM334224Populus balsamifera_1006_mature_leaf_midday_1GSE13990Populus balsamifera developmental tissue seriesLink to GEO
2.389.8GSM372090Clone3200_LPI2_N+_4w_rep2GSE14893Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 3200Link to GEO
2.188.6GSM327408Populus balsamifera_1006_root_midday_2GSE13990Populus balsamifera developmental tissue seriesLink to GEO
1.987.2GSM328565Populus x canescens root hypoxia_rep_07GSE13109Effect of hypoxia on gene expression in Grey poplarLink to GEO
1.886.4GSM327407Populus balsamifera_1006_root_midday_1GSE13990Populus balsamifera developmental tissue seriesLink to GEO

Inter-species module comparison

A co-expression module including the maize gene, Zm.12792.1.A1_at, orthologous to the query gene, PtpAffx.127059.1.A1_at

VF%ileGene IDRepr. IDGene NameFunc.EvAGI codeArabidopsis gene nameO.I.H.G.S.X.Other DB
0.9199.0Zm.12792.1.A1_atAt1g66270hypothetical protein LOC100272306-4e-1At1g69040ACR4 (ACT REPEAT 4)O.I.H.G.S.X.
0.6785.8Zm.9025.1.A1_atAt1g66270mitochondrial import inner membrane translocase subunit TIM14-7e-12At3g09700DNAJ heat shock N-terminal domain-containing proteinO.I.H.G.S.X.
0.6077.8Zm.2455.1.A1_atAt1g66270SET domain protein 110-5e+0At4g24420RNA recognition motif (RRM)-containing proteinO.I.H.G.S.X.
0.5065.7Zm.2400.1.A1_atAt1g66270disease resistance response protein 206-7e-3At3g60270uclacyanin, putativeO.I.H.G.S.X.
0.3336.0Zm.13437.1.S1_atAt1g66270cpSecY-2e-36At2g18710SCY1 (SecY Homolog 1)O.I.H.G.S.X.
0.2928.1Zm.14435.1.S1_atAt1g6627060S ribosomal protein L22-2-3e-35At3g0556060S ribosomal protein L22-2 (RPL22B)O.I.H.G.S.X.

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Triticum_aestivum
Vitis_vinifera



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