Co-expression analysis

Gene ID PtpAffx.121458.1.A1_s_at
Gene name hypothetical protein
Homology with ArabidopsisSimilar to At3g20650: mRNA capping enzyme family protein (HF=3e-14)
Module size 7 genes
NF 0.39
%ile 67.1

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.6187.00.96PtpAffx.121458.1.A1_s_atCV239175hypothetical protein-3e-14At3g20650mRNA capping enzyme family proteinO.I.H.G.S.X.
0.6791.10.96PtpAffx.223266.1.S1_atpmrna41180hypothetical protein-1e-95At1g10240FRS11 (FAR1-related sequence 11)O.I.H.G.S.X.
0.5078.60.97PtpAffx.22299.1.S1_atCN549751f-box family protein-6e-53At3g54480SKIP5 (SKP1/ASK-INTERACTING PROTEIN 5)O.I.H.G.S.X.
0.3863.70.96PtpAffx.12239.1.A1_atCV258360--2e+0At4g22740glycine-rich proteinO.I.H.G.S.X.
0.2950.50.96Ptp.7493.1.S1_s_atCV266457glutathione peroxidase-2e-34At4g11600ATGPX6 (GLUTATHIONE PEROXIDASE 6)O.I.H.G.S.X.
0.2747.10.96PtpAffx.163577.1.S1_atBU835464hypothetical protein-1e-13At2g41945unknown proteinO.I.H.G.S.X.
0.2747.10.97PtpAffx.72180.1.S1_s_atAI162185hypothetical protein-4e-13At3g51040RTH (RTE1-HOMOLOG)O.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
5.597.1GSM372096Clone3200_LPI5_N-_4w_rep2GSE14893Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 3200Link to GEO
4.395.8GSM362888Clone1979_LPI5_N+_4w_rep2GSE14515Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 1979Link to GEO
3.794.7GSM327404Populus balsamifera_1006_young_leaf_midday_1GSE13990Populus balsamifera developmental tissue seriesLink to GEO
2.892.1GSM372095Clone3200_LPI5_N-_4w_rep1GSE14893Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 3200Link to GEO
2.590.9GSM362883Clone1979_LPI2_N+_4w_rep1GSE14515Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 1979Link to GEO
2.389.8GSM327656Populus balsamifera_Female_Catkin_midday_1GSE13990Populus balsamifera developmental tissue seriesLink to GEO
2.389.8GSM362886Clone1979_LPI2_N-_4w_rep2GSE14515Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 1979Link to GEO
2.289.3GSM327657Populus balsamifera_Female_Catkin_midday_2GSE13990Populus balsamifera developmental tissue seriesLink to GEO
2.088.0GSM362885Clone1979_LPI2_N-_4w_rep1GSE14515Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 1979Link to GEO
1.987.2GSM327411Populus balsamifera_1006_differentiating_xylem_midday_1GSE13990Populus balsamifera developmental tissue seriesLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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