Co-expression analysis

Gene ID PtpAffx.119499.2.A1_s_at
Gene name hypothetical protein
Homology with ArabidopsisSimilar to At1g10950: endomembrane protein 70, putative (HF=3e-52)
Module size 6 genes
NF 0.37
%ile 63.5

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.5784.20.96PtpAffx.119499.2.A1_s_atBP930188hypothetical protein-3e-52At1g10950endomembrane protein 70, putativeO.I.H.G.S.X.
0.6086.00.96Ptp.6063.1.S1_atCV231920hypothetical protein-8e-9At5g06660unknown proteinO.I.H.G.S.X.
0.5784.20.96Ptp.5458.1.S1_s_atCV261214hypothetical protein-2e+0At5g22650HD2B (HISTONE DEACETYLASE 2B)O.I.H.G.S.X.
0.4471.90.97PtpAffx.5430.1.S1_x_atCF228221hypothetical protein-1e-103At1g19910AVA-P2O.I.H.G.S.X.
0.2238.30.96PtpAffx.89308.1.A1_atCV229890hypothetical protein-9e-5At4g01040glycosyl hydrolase family 18 proteinO.I.H.G.S.X.
0.2238.30.96PtpAffx.113217.1.S1_s_atCN520202hypothetical protein-1e-32At2g25310carbohydrate bindingO.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
2.892.1GSM327404Populus balsamifera_1006_young_leaf_midday_1GSE13990Populus balsamifera developmental tissue seriesLink to GEO
2.691.3GSM327405Populus balsamifera_1006_young_leaf_midday_2GSE13990Populus balsamifera developmental tissue seriesLink to GEO
2.188.6GSM328059Populus x canescens leaf control_rep_01GSE13109Effect of hypoxia on gene expression in Grey poplarLink to GEO
1.987.2GSM327408Populus balsamifera_1006_root_midday_2GSE13990Populus balsamifera developmental tissue seriesLink to GEO
1.886.4GSM328066Populus x canescens leaf control_rep_04GSE13109Effect of hypoxia on gene expression in Grey poplarLink to GEO
1.684.5GSM334226Populus balsamifera_1006_mature_leaf_midday_3GSE13990Populus balsamifera developmental tissue seriesLink to GEO
1.684.5GSM372098Clone3200_LPI5_N-_8w_rep2GSE14893Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 3200Link to GEO
1.684.5GSM244434Mlp infected tissue, biological rep2GSE9673Comparative transcriptomic reveals signatures specific to various interactions with Melampsora rust fungiLink to GEO
1.583.5GSM328077Populus x canescens leaf control_rep_06GSE13109Effect of hypoxia on gene expression in Grey poplarLink to GEO
1.583.5GSM372095Clone3200_LPI5_N-_4w_rep1GSE14893Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 3200Link to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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