Co-expression analysis

Gene ID PtpAffx.1172.2.A1_at
Gene name
Homology with ArabidopsisSimilar to At1g48780: unknown protein (HF=1e+0)
Module size 13 genes
NF 0.34
%ile 60.2

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.6588.60.90PtpAffx.1172.2.A1_atCV232336--1e+0At1g48780unknown proteinO.I.H.G.S.X.
0.5784.20.93PtpAffx.203080.1.S1_atpmrna6095hypothetical protein-3e-24At3g51470protein phosphatase 2C, putative / PP2C, putativeO.I.H.G.S.X.
0.5078.60.90PtpAffx.214837.1.S1_atpmrna28728white-brown-complex ABC transporter family-4e-3At4g27420ABC transporter family proteinO.I.H.G.S.X.
0.3255.20.94PtpAffx.63071.1.A1_atCV255719--1e-1At4g19200proline-rich family proteinO.I.H.G.S.X.
0.3255.20.92PtpAffx.203223.1.S1_atpmrna6387hypothetical protein-4e-18At1g63120ATRBL2 (Arabidopsis thaliana Rhomboid-like 2)O.I.H.G.S.X.
0.3255.20.94PtpAffx.204982.1.S1_s_atpmrna9866hypothetical protein-3e-12At5g59790unknown proteinO.I.H.G.S.X.
0.3052.00.95Ptp.5560.1.A1_atCK087847hypothetical protein-5e+0At5g52040ATRSP41O.I.H.G.S.X.
0.2950.50.94PtpAffx.202007.1.S1_atpmrna4000amino acid transporter-2e-1At1g52040MBP1 (MYROSINASE-BINDING PROTEIN 1)O.I.H.G.S.X.
0.2747.10.92PtpAffx.213868.1.S1_atpmrna27051hypothetical protein-3e-46At3g27440uracil phosphoribosyltransferase, putative / UMP pyrophosphorylase, putative / UPRTase, putativeO.I.H.G.S.X.
0.2747.10.94PtpAffx.21546.1.S1_atDN494511hypothetical protein-4e+0At4g01460basic helix-loop-helix (bHLH) family proteinO.I.H.G.S.X.
0.2340.50.95PtpAffx.66439.1.S1_a_atDN485169hypothetical protein-9e-15At3g50110ATPEN3 (ARABIDOPSIS THALIANA PTEN 3)O.I.H.G.S.X.
0.2136.50.94PtpAffx.153966.2.A1_atCV235142hypothetical protein-1e-7At1g65320CBS domain-containing proteinO.I.H.G.S.X.
0.1525.30.91PtpAffx.7814.2.A1_atCV281562hypothetical protein-7e-12At5g47180vesicle-associated membrane family protein / VAMP family proteinO.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
5.096.6GSM327656Populus balsamifera_Female_Catkin_midday_1GSE13990Populus balsamifera developmental tissue seriesLink to GEO
4.596.1GSM327657Populus balsamifera_Female_Catkin_midday_2GSE13990Populus balsamifera developmental tissue seriesLink to GEO
4.195.5GSM327658Populus balsamifera_Female_Catkin_midday_3GSE13990Populus balsamifera developmental tissue seriesLink to GEO
3.293.5GSM327661Populus balsamifera_Male_Catkin_midday_3GSE13990Populus balsamifera developmental tissue seriesLink to GEO
3.193.2GSM327660Populus balsamifera_Male_Catkin_midday_2GSE13990Populus balsamifera developmental tissue seriesLink to GEO
3.092.9GSM327659Populus balsamifera_Male_Catkin_midday_1GSE13990Populus balsamifera developmental tissue seriesLink to GEO
2.791.8GSM334225Populus balsamifera_1006_mature_leaf_midday_2GSE13990Populus balsamifera developmental tissue seriesLink to GEO
2.188.6GSM334226Populus balsamifera_1006_mature_leaf_midday_3GSE13990Populus balsamifera developmental tissue seriesLink to GEO
2.188.6GSM362886Clone1979_LPI2_N-_4w_rep2GSE14515Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 1979Link to GEO
1.785.5GSM362887Clone1979_LPI5_N+_4w_rep1GSE14515Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 1979Link to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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