CoP: Co-expressed Biological Processes

Co-expression analysis

Gene ID PtpAffx.11623.1.A1_at

Gene name hypothetical protein
Homology with Arabidopsis Similar to At5g09850: transcription elongation factor-related (HF=8e-25)

Module size 6 genes

NF 0.53

%ile 84.1

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func. Ev AGI code Arabidopsis gene name O.I. H.G. S.X. Other DB
0.67 91.1 0.95 PtpAffx.11623.1.A1_at CV260515 hypothetical protein - 8e-25 At5g09850 transcription elongation factor-related O.I. H.G. S.X.
0.60 86.0 0.95 PtpAffx.13792.2.S1_at CV283738 hypothetical protein - 7e-14 At4g10610 CID12 O.I. H.G. S.X.
0.50 78.6 0.95 Ptp.824.1.S1_x_at CF936396 hypothetical protein - 2e+0 At4g20250 unknown protein O.I. H.G. S.X.
0.50 78.6 0.95 PtpAffx.20260.2.S1_a_at CV257316 hypothetical protein - 1e-3 At4g22190 unknown protein O.I. H.G. S.X.
0.44 71.9 0.97 PtpAffx.692.1.S1_x_at CX185889 hypothetical protein - 1e-1 At5g23950 C2 domain-containing protein O.I. H.G. S.X.
0.39 64.6 0.95 Ptp.3673.1.S1_s_at CK096543 hypothetical protein - 6e-1 At4g00355 unknown protein O.I. H.G. S.X.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.
0.67	91.1	0.95	PtpAffx.11623.1.A1_at	CV260515	hypothetical protein	-	8e-25	At5g09850	transcription elongation factor-related	O.I.	H.G.	S.X.
0.60	86.0	0.95	PtpAffx.13792.2.S1_at	CV283738	hypothetical protein	-	7e-14	At4g10610	CID12	O.I.	H.G.	S.X.
0.50	78.6	0.95	Ptp.824.1.S1_x_at	CF936396	hypothetical protein	-	2e+0	At4g20250	unknown protein	O.I.	H.G.	S.X.
0.50	78.6	0.95	PtpAffx.20260.2.S1_a_at	CV257316	hypothetical protein	-	1e-3	At4g22190	unknown protein	O.I.	H.G.	S.X.
0.44	71.9	0.97	PtpAffx.692.1.S1_x_at	CX185889	hypothetical protein	-	1e-1	At5g23950	C2 domain-containing protein	O.I.	H.G.	S.X.
0.39	64.6	0.95	Ptp.3673.1.S1_s_at	CK096543	hypothetical protein	-	6e-1	At4g00355	unknown protein	O.I.	H.G.	S.X.

Click More genes

Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
3.0 92.9 GSM327411 Populus balsamifera_1006_differentiating_xylem_midday_1 GSE13990 Populus balsamifera developmental tissue series
2.7 91.8 GSM328284 Populus x canescens root control_rep_03 GSE13109 Effect of hypoxia on gene expression in Grey poplar
2.5 90.9 GSM327661 Populus balsamifera_Male_Catkin_midday_3 GSE13990 Populus balsamifera developmental tissue series
2.5 90.9 GSM327404 Populus balsamifera_1006_young_leaf_midday_1 GSE13990 Populus balsamifera developmental tissue series
2.3 89.8 GSM327409 Populus balsamifera_1006_root_midday_3 GSE13990 Populus balsamifera developmental tissue series
2.3 89.8 GSM328285 Populus x canescens root control_rep_04 GSE13109 Effect of hypoxia on gene expression in Grey poplar
2.2 89.3 GSM328534 Populus x canescens root control_rep_07 GSE13109 Effect of hypoxia on gene expression in Grey poplar
2.1 88.6 GSM328560 Populus x canescens root control_rep_11 GSE13109 Effect of hypoxia on gene expression in Grey poplar
2.1 88.6 GSM328559 Populus x canescens root control_rep_10 GSE13109 Effect of hypoxia on gene expression in Grey poplar
2.1 88.6 GSM328277 Populus x canescens root control_rep_01 GSE13109 Effect of hypoxia on gene expression in Grey poplar

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title
3.0	92.9	GSM327411	Populus balsamifera_1006_differentiating_xylem_midday_1	GSE13990	Populus balsamifera developmental tissue series
2.7	91.8	GSM328284	Populus x canescens root control_rep_03	GSE13109	Effect of hypoxia on gene expression in Grey poplar
2.5	90.9	GSM327661	Populus balsamifera_Male_Catkin_midday_3	GSE13990	Populus balsamifera developmental tissue series
2.5	90.9	GSM327404	Populus balsamifera_1006_young_leaf_midday_1	GSE13990	Populus balsamifera developmental tissue series
2.3	89.8	GSM327409	Populus balsamifera_1006_root_midday_3	GSE13990	Populus balsamifera developmental tissue series
2.3	89.8	GSM328285	Populus x canescens root control_rep_04	GSE13109	Effect of hypoxia on gene expression in Grey poplar
2.2	89.3	GSM328534	Populus x canescens root control_rep_07	GSE13109	Effect of hypoxia on gene expression in Grey poplar
2.1	88.6	GSM328560	Populus x canescens root control_rep_11	GSE13109	Effect of hypoxia on gene expression in Grey poplar
2.1	88.6	GSM328559	Populus x canescens root control_rep_10	GSE13109	Effect of hypoxia on gene expression in Grey poplar
2.1	88.6	GSM328277	Populus x canescens root control_rep_01	GSE13109	Effect of hypoxia on gene expression in Grey poplar

Inter-species module comparison

A co-expression module including the Arabidopsis gene, At5g09850, orthologous to the query gene, PtpAffx.11623.1.A1_at

VF %ile Gene ID Repr. ID Gene Name Func. O.I. H.G. S.X. Other DB
0.71 84.2 At5g09850 830845 transcription elongation factor-related F:protein binding, transcription regulator activity, DNA binding;P:transcription;C:cytosol;MPOFBV O.I. H.G. S.X.
0.67 81.6 At4g36630 829815 EMB2754 (EMBRYO DEFECTIVE 2754) F:small GTPase regulator activity, binding;P:embryonic development ending in seed dormancy;C:cellular_component unknown;MFOP O.I. H.G. S.X.
0.65 79.6 At1g77140 844050 VPS45 (VACUOLAR PROTEIN SORTING 45) A peripheral membrane protein that associates with microsomal membranes, likely to function in the transport of proteins to the vacuole. It is a member of Sec1p protein family. It may be involved in the regulation of vesicle fusion reactions through interaction with t-SNAREs at the Golgi trans face. O.I. H.G. S.X.
0.60 75.7 At5g35980 833590 protein kinase family protein F:protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding;P:protein amino acid phosphorylation;C:cytosol;MOPFBVA O.I. H.G. S.X.
0.57 73.8 At5g18190 831937 protein kinase family protein F:protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding;P:protein amino acid phosphorylation;C:cellular_component unknown;MBOPFVA O.I. H.G. S.X.
0.52 67.4 At5g07270 830618 ankyrin repeat family protein F:ubiquitin-protein ligase activity, protein binding;P:N-terminal protein myristoylation;C:unknown;MOFBPVA O.I. H.G. S.X.
0.52 67.4 At5g14950 831347 GMII (GOLGI ALPHA-MANNOSIDASE II) Encodes a golgi alpha-mannosidase, an enzyme responsible for the formation of major complex-type N-glycans. O.I. H.G. S.X.
0.50 65.3 At3g10380 820201 SEC8 (SUBUNIT OF EXOCYST COMPLEX 8) Subunit of the Putative Arabidopsis Exocyst Complex O.I. H.G. S.X.
0.50 65.3 At3g50590 824223 nucleotide binding F:nucleotide binding;P:biological_process unknown;C:plasma membrane;MBFOPV O.I. H.G. S.X.
0.49 63.5 At5g41940 834199 RabGAP/TBC domain-containing protein F:RAB GTPase activator activity;P:regulation of Rab GTPase activity;C:intracellular;MOFPBVA O.I. H.G. S.X.
0.49 63.5 At4g10570 826649 UBP9 (UBIQUITIN-SPECIFIC PROTEASE 9) encodes a ubiquitin-specific protease family member, UBP9. O.I. H.G. S.X.
0.49 63.5 At3g58050 824974 unknown protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MOFBPVA O.I. H.G. S.X.
0.48 62.5 At1g21630 838765 calcium-binding EF hand family protein F:calcium ion binding;P:unknown;C:cytosol, plasma membrane;BMOFPVA O.I. H.G. S.X.
0.47 61.2 At2g27900 817335 unknown protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MPO O.I. H.G. S.X.
0.47 61.2 At3g25800 822171 PP2AA2 (PROTEIN PHOSPHATASE 2A SUBUNIT A2) one of three genes encoding the protein phosphatase 2A regulatory subunit O.I. H.G. S.X.
0.47 61.2 At3g59770 825146 SAC9 Encodes a phosphoinositide phosphatase. The sac9 null mutant accumulates elevated levels of PtdIns(4,5)P2 and Ins(1,4,5)P3. The mutant plants have characteristics of constitutive stress responses. O.I. H.G. S.X.
0.47 61.2 At2g05170 815065 ATVPS11 Homologous to yeast VPS11. Forms a complex with VCL1 and AtVPS33. Involved in vacuolar biogenesis. O.I. H.G. S.X.
0.46 59.8 At2g38020 818380 VCL1 (VACUOLELESS 1) necessary for proper vacuole formation and morphogenesis in Arabidopsis O.I. H.G. S.X.
0.46 59.8 At1g71820 843512 SEC6 F:molecular_function unknown;P:pollen germination, pollen tube growth;C:plasma membrane, exocyst;MFOPBA O.I. H.G. S.X.
0.44 57.2 At1g76850 844020 SEC5A (EXOCYST COMPLEX COMPONENT SEC5) F:molecular_function unknown;P:pollen germination, pollen tube growth;C:cytosol, plasma membrane;MFPOVB O.I. H.G. S.X.
0.44 57.2 At5g05700 830454 ATE1 (ARGININE-TRNA PROTEIN TRANSFERASE 1) Encodes an arginyl-tRNA:protein transferase (ATE1), a component of the N-end rule pathway that targets protein degradation through the identity of the amino-terminal residue of specific protein substrates. Arabidopsis contains two ATE genes: At5g05700/ATE1, At3g11240/ATE2. Another component of the N-end rule pathway is At5g02310/PROTEOLYSIS6 (PRT6). PRT6 and ATE were shown to regulate seed after-ripening, seedling sugar sensitivity, seedling lipid breakdown, and abscisic acid (ABA) sensitivity of germination. Mutants of ATE1 also display delayed leaf senescence. O.I. H.G. S.X.
0.43 55.3 At5g49950 835059 embryogenesis-associated protein-related F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;BOMFP O.I. H.G. S.X.
0.42 53.9 At1g69340 843266 appr-1-p processing enzyme family protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;BMOPFAV O.I. H.G. S.X.
0.41 52.4 At1g16010 838171 magnesium transporter CorA-like family protein (MRS2-1) F:metal ion transmembrane transporter activity;P:metal ion transport;C:vacuole, membrane;PFOMBA O.I. H.G. S.X.
0.41 52.4 At1g48790 841301 mov34 family protein F:molecular_function unknown;P:ubiquitin-dependent protein catabolic process;C:cellular_component unknown;MFPO O.I. H.G. S.X.
0.38 46.7 At5g16280 831488 unknown protein F:unknown;P:biological_process unknown;C:endomembrane system;MFOPV O.I. H.G. S.X.
0.38 46.7 At3g54860 824651 vacuolar protein sorting protein, putative Homologous to yeast VPS33. Forms a complex with VCL1 and AtVPS11. Involved in vacuolar biogenesis. O.I. H.G. S.X.
0.37 45.0 At3g56740 824841 ubiquitin-associated (UBA)/TS-N domain-containing protein F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;FMPOB O.I. H.G. S.X.
0.37 45.0 At1g22020 838807 SHM6 (serine hydroxymethyltransferase 6) Encodes a putative serine hydroxymethyltransferase. O.I. H.G. S.X.
0.36 43.6 At5g11490 831021 adaptin family protein F:protein transporter activity, protein binding, binding;P:intracellular protein transport, vesicle-mediated transport, protein transport;C:membrane coat, clathrin adaptor complex;MFOP O.I. H.G. S.X.
0.35 41.6 At3g05090 819671 transducin family protein / WD-40 repeat family protein F:nucleotide binding;P:biological_process unknown;C:CUL4 RING ubiquitin ligase complex;MFOBPAV O.I. H.G. S.X.
0.34 39.8 At3g22170 821781 FHY3 (FAR-RED ELONGATED HYPOCOTYLS 3) A component of the PHYA signaling network, mediates the FR-HIR response to far-red light in concert with FAR1. O.I. H.G. S.X.
0.34 39.8 At4g23640 828464 TRH1 (TINY ROOT HAIR 1) Functions as a potassium transporter and is required for the establishment of root tip growth. O.I. H.G. S.X.
0.32 35.7 At4g33650 829506 DRP3A (DYNAMIN-RELATED PROTEIN 3A) Encodes a protein with high sequence similarity to the dynamin superfamily. Among those members ADL2 was most closely related to Dnm1p of yeast and likely a member of the Vps1p subfamily. Widely expressed in various tissues with highest expression in flower tissues. Localizes to the chloroplast, mitochondrion and peroxisome. Involved in peroxisome and mitochondria fission in combination with DRP3B. O.I. H.G. S.X.
0.31 33.8 At4g00660 828042 DEAD/DEAH box helicase, putative F:helicase activity, nucleic acid binding, ATP binding, ATP-dependent helicase activity;P:unknown;C:unknown;BOMFPAV O.I. H.G. S.X.
0.30 32.1 At4g37880 829944 protein binding / zinc ion binding F:protein binding, zinc ion binding;P:biological_process unknown;C:cellular_component unknown;MFOP O.I. H.G. S.X.
0.29 30.3 At5g06120 830499 Ran-binding protein, putative F:protein transporter activity, binding;P:intracellular protein transport, protein import into nucleus, docking;C:nucleus, nuclear pore, cytoplasm;MOP O.I. H.G. S.X.
0.28 30.3 At1g78800 844216 glycosyl transferase family 1 protein F:transferase activity, transferring glycosyl groups;P:biosynthetic process;C:cellular_component unknown;BOAPMF O.I. H.G. S.X.
0.27 26.2 At4g31480 829275 coatomer beta subunit, putative / beta-coat protein, putative / beta-COP, putative F:protein binding, clathrin binding, structural molecule activity, binding;P:intracellular protein transport, vesicle-mediated transport;C:membrane coat, endomembrane system, COPI vesicle coat;MOFP O.I. H.G. S.X.

VF	%ile	Gene ID	Repr. ID	Gene Name	Func.	O.I.	H.G.	S.X.
0.71	84.2	At5g09850	830845	transcription elongation factor-related	F:protein binding, transcription regulator activity, DNA binding;P:transcription;C:cytosol;MPOFBV	O.I.	H.G.	S.X.
0.67	81.6	At4g36630	829815	EMB2754 (EMBRYO DEFECTIVE 2754)	F:small GTPase regulator activity, binding;P:embryonic development ending in seed dormancy;C:cellular_component unknown;MFOP	O.I.	H.G.	S.X.
0.65	79.6	At1g77140	844050	VPS45 (VACUOLAR PROTEIN SORTING 45)	A peripheral membrane protein that associates with microsomal membranes, likely to function in the transport of proteins to the vacuole. It is a member of Sec1p protein family. It may be involved in the regulation of vesicle fusion reactions through interaction with t-SNAREs at the Golgi trans face.	O.I.	H.G.	S.X.
0.60	75.7	At5g35980	833590	protein kinase family protein	F:protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding;P:protein amino acid phosphorylation;C:cytosol;MOPFBVA	O.I.	H.G.	S.X.
0.57	73.8	At5g18190	831937	protein kinase family protein	F:protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding;P:protein amino acid phosphorylation;C:cellular_component unknown;MBOPFVA	O.I.	H.G.	S.X.
0.52	67.4	At5g07270	830618	ankyrin repeat family protein	F:ubiquitin-protein ligase activity, protein binding;P:N-terminal protein myristoylation;C:unknown;MOFBPVA	O.I.	H.G.	S.X.
0.52	67.4	At5g14950	831347	GMII (GOLGI ALPHA-MANNOSIDASE II)	Encodes a golgi alpha-mannosidase, an enzyme responsible for the formation of major complex-type N-glycans.	O.I.	H.G.	S.X.
0.50	65.3	At3g10380	820201	SEC8 (SUBUNIT OF EXOCYST COMPLEX 8)	Subunit of the Putative Arabidopsis Exocyst Complex	O.I.	H.G.	S.X.
0.50	65.3	At3g50590	824223	nucleotide binding	F:nucleotide binding;P:biological_process unknown;C:plasma membrane;MBFOPV	O.I.	H.G.	S.X.
0.49	63.5	At5g41940	834199	RabGAP/TBC domain-containing protein	F:RAB GTPase activator activity;P:regulation of Rab GTPase activity;C:intracellular;MOFPBVA	O.I.	H.G.	S.X.
0.49	63.5	At4g10570	826649	UBP9 (UBIQUITIN-SPECIFIC PROTEASE 9)	encodes a ubiquitin-specific protease family member, UBP9.	O.I.	H.G.	S.X.
0.49	63.5	At3g58050	824974	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MOFBPVA	O.I.	H.G.	S.X.
0.48	62.5	At1g21630	838765	calcium-binding EF hand family protein	F:calcium ion binding;P:unknown;C:cytosol, plasma membrane;BMOFPVA	O.I.	H.G.	S.X.
0.47	61.2	At2g27900	817335	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MPO	O.I.	H.G.	S.X.
0.47	61.2	At3g25800	822171	PP2AA2 (PROTEIN PHOSPHATASE 2A SUBUNIT A2)	one of three genes encoding the protein phosphatase 2A regulatory subunit	O.I.	H.G.	S.X.
0.47	61.2	At3g59770	825146	SAC9	Encodes a phosphoinositide phosphatase. The sac9 null mutant accumulates elevated levels of PtdIns(4,5)P2 and Ins(1,4,5)P3. The mutant plants have characteristics of constitutive stress responses.	O.I.	H.G.	S.X.
0.47	61.2	At2g05170	815065	ATVPS11	Homologous to yeast VPS11. Forms a complex with VCL1 and AtVPS33. Involved in vacuolar biogenesis.	O.I.	H.G.	S.X.
0.46	59.8	At2g38020	818380	VCL1 (VACUOLELESS 1)	necessary for proper vacuole formation and morphogenesis in Arabidopsis	O.I.	H.G.	S.X.
0.46	59.8	At1g71820	843512	SEC6	F:molecular_function unknown;P:pollen germination, pollen tube growth;C:plasma membrane, exocyst;MFOPBA	O.I.	H.G.	S.X.
0.44	57.2	At1g76850	844020	SEC5A (EXOCYST COMPLEX COMPONENT SEC5)	F:molecular_function unknown;P:pollen germination, pollen tube growth;C:cytosol, plasma membrane;MFPOVB	O.I.	H.G.	S.X.
0.44	57.2	At5g05700	830454	ATE1 (ARGININE-TRNA PROTEIN TRANSFERASE 1)	Encodes an arginyl-tRNA:protein transferase (ATE1), a component of the N-end rule pathway that targets protein degradation through the identity of the amino-terminal residue of specific protein substrates. Arabidopsis contains two ATE genes: At5g05700/ATE1, At3g11240/ATE2. Another component of the N-end rule pathway is At5g02310/PROTEOLYSIS6 (PRT6). PRT6 and ATE were shown to regulate seed after-ripening, seedling sugar sensitivity, seedling lipid breakdown, and abscisic acid (ABA) sensitivity of germination. Mutants of ATE1 also display delayed leaf senescence.	O.I.	H.G.	S.X.
0.43	55.3	At5g49950	835059	embryogenesis-associated protein-related	F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;BOMFP	O.I.	H.G.	S.X.
0.42	53.9	At1g69340	843266	appr-1-p processing enzyme family protein	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;BMOPFAV	O.I.	H.G.	S.X.
0.41	52.4	At1g16010	838171	magnesium transporter CorA-like family protein (MRS2-1)	F:metal ion transmembrane transporter activity;P:metal ion transport;C:vacuole, membrane;PFOMBA	O.I.	H.G.	S.X.
0.41	52.4	At1g48790	841301	mov34 family protein	F:molecular_function unknown;P:ubiquitin-dependent protein catabolic process;C:cellular_component unknown;MFPO	O.I.	H.G.	S.X.
0.38	46.7	At5g16280	831488	unknown protein	F:unknown;P:biological_process unknown;C:endomembrane system;MFOPV	O.I.	H.G.	S.X.
0.38	46.7	At3g54860	824651	vacuolar protein sorting protein, putative	Homologous to yeast VPS33. Forms a complex with VCL1 and AtVPS11. Involved in vacuolar biogenesis.	O.I.	H.G.	S.X.
0.37	45.0	At3g56740	824841	ubiquitin-associated (UBA)/TS-N domain-containing protein	F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;FMPOB	O.I.	H.G.	S.X.
0.37	45.0	At1g22020	838807	SHM6 (serine hydroxymethyltransferase 6)	Encodes a putative serine hydroxymethyltransferase.	O.I.	H.G.	S.X.
0.36	43.6	At5g11490	831021	adaptin family protein	F:protein transporter activity, protein binding, binding;P:intracellular protein transport, vesicle-mediated transport, protein transport;C:membrane coat, clathrin adaptor complex;MFOP	O.I.	H.G.	S.X.
0.35	41.6	At3g05090	819671	transducin family protein / WD-40 repeat family protein	F:nucleotide binding;P:biological_process unknown;C:CUL4 RING ubiquitin ligase complex;MFOBPAV	O.I.	H.G.	S.X.
0.34	39.8	At3g22170	821781	FHY3 (FAR-RED ELONGATED HYPOCOTYLS 3)	A component of the PHYA signaling network, mediates the FR-HIR response to far-red light in concert with FAR1.	O.I.	H.G.	S.X.
0.34	39.8	At4g23640	828464	TRH1 (TINY ROOT HAIR 1)	Functions as a potassium transporter and is required for the establishment of root tip growth.	O.I.	H.G.	S.X.
0.32	35.7	At4g33650	829506	DRP3A (DYNAMIN-RELATED PROTEIN 3A)	Encodes a protein with high sequence similarity to the dynamin superfamily. Among those members ADL2 was most closely related to Dnm1p of yeast and likely a member of the Vps1p subfamily. Widely expressed in various tissues with highest expression in flower tissues. Localizes to the chloroplast, mitochondrion and peroxisome. Involved in peroxisome and mitochondria fission in combination with DRP3B.	O.I.	H.G.	S.X.
0.31	33.8	At4g00660	828042	DEAD/DEAH box helicase, putative	F:helicase activity, nucleic acid binding, ATP binding, ATP-dependent helicase activity;P:unknown;C:unknown;BOMFPAV	O.I.	H.G.	S.X.
0.30	32.1	At4g37880	829944	protein binding / zinc ion binding	F:protein binding, zinc ion binding;P:biological_process unknown;C:cellular_component unknown;MFOP	O.I.	H.G.	S.X.
0.29	30.3	At5g06120	830499	Ran-binding protein, putative	F:protein transporter activity, binding;P:intracellular protein transport, protein import into nucleus, docking;C:nucleus, nuclear pore, cytoplasm;MOP	O.I.	H.G.	S.X.
0.28	30.3	At1g78800	844216	glycosyl transferase family 1 protein	F:transferase activity, transferring glycosyl groups;P:biosynthetic process;C:cellular_component unknown;BOAPMF	O.I.	H.G.	S.X.
0.27	26.2	At4g31480	829275	coatomer beta subunit, putative / beta-coat protein, putative / beta-COP, putative	F:protein binding, clathrin binding, structural molecule activity, binding;P:intracellular protein transport, vesicle-mediated transport;C:membrane coat, endomembrane system, COPI vesicle coat;MOFP	O.I.	H.G.	S.X.

Select a plant to compare co-expressed genes between species.
Glycine_max
Hordeum_vulgare
Oryza_sativa
Triticum_aestivum
Vitis_vinifera
Zea_mays

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Gene ID	PtpAffx.11623.1.A1_at
Gene name	hypothetical protein
Homology with Arabidopsis	Similar to At5g09850: transcription elongation factor-related (HF=8e-25)
Module size	6 genes
NF	0.53
%ile	84.1

Co-expression analysis

Gene ID PtpAffx.11623.1.A1_at Gene name hypothetical protein Homology with ArabidopsisSimilar to At5g09850: transcription elongation factor-related (HF=8e-25) Module size 6 genes NF 0.53 %ile 84.1

Co-expressed genes

Click More genes

Specific experiments for the module

Inter-species module comparison

Select a plant to compare co-expressed genes between species.Glycine_maxHordeum_vulgareOryza_sativaTriticum_aestivumVitis_viniferaZea_mays

Gene ID PtpAffx.11623.1.A1_at

Gene name hypothetical protein
Homology with Arabidopsis Similar to At5g09850: transcription elongation factor-related (HF=8e-25)

Module size 6 genes

NF 0.53

%ile 84.1

Select a plant to compare co-expressed genes between species.
Glycine_max
Hordeum_vulgare
Oryza_sativa
Triticum_aestivum
Vitis_vinifera
Zea_mays