Co-expression analysis

Gene ID PtpAffx.11623.1.A1_at
Gene name hypothetical protein
Homology with ArabidopsisSimilar to At5g09850: transcription elongation factor-related (HF=8e-25)
Module size 6 genes
NF 0.53
%ile 84.1

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.6791.10.95PtpAffx.11623.1.A1_atCV260515hypothetical protein-8e-25At5g09850transcription elongation factor-relatedO.I.H.G.S.X.
0.6086.00.95PtpAffx.13792.2.S1_atCV283738hypothetical protein-7e-14At4g10610CID12O.I.H.G.S.X.
0.5078.60.95Ptp.824.1.S1_x_atCF936396hypothetical protein-2e+0At4g20250unknown proteinO.I.H.G.S.X.
0.5078.60.95PtpAffx.20260.2.S1_a_atCV257316hypothetical protein-1e-3At4g22190unknown proteinO.I.H.G.S.X.
0.4471.90.97PtpAffx.692.1.S1_x_atCX185889hypothetical protein-1e-1At5g23950C2 domain-containing proteinO.I.H.G.S.X.
0.3964.60.95Ptp.3673.1.S1_s_atCK096543hypothetical protein-6e-1At4g00355unknown proteinO.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
3.092.9GSM327411Populus balsamifera_1006_differentiating_xylem_midday_1GSE13990Populus balsamifera developmental tissue seriesLink to GEO
2.791.8GSM328284Populus x canescens root control_rep_03GSE13109Effect of hypoxia on gene expression in Grey poplarLink to GEO
2.590.9GSM327661Populus balsamifera_Male_Catkin_midday_3GSE13990Populus balsamifera developmental tissue seriesLink to GEO
2.590.9GSM327404Populus balsamifera_1006_young_leaf_midday_1GSE13990Populus balsamifera developmental tissue seriesLink to GEO
2.389.8GSM327409Populus balsamifera_1006_root_midday_3GSE13990Populus balsamifera developmental tissue seriesLink to GEO
2.389.8GSM328285Populus x canescens root control_rep_04GSE13109Effect of hypoxia on gene expression in Grey poplarLink to GEO
2.289.3GSM328534Populus x canescens root control_rep_07GSE13109Effect of hypoxia on gene expression in Grey poplarLink to GEO
2.188.6GSM328560Populus x canescens root control_rep_11GSE13109Effect of hypoxia on gene expression in Grey poplarLink to GEO
2.188.6GSM328559Populus x canescens root control_rep_10GSE13109Effect of hypoxia on gene expression in Grey poplarLink to GEO
2.188.6GSM328277Populus x canescens root control_rep_01GSE13109Effect of hypoxia on gene expression in Grey poplarLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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