Co-expression analysis

Gene ID	PtpAffx.115064.1.A1_at
Gene name	l-ascorbate oxidase precursor
Homology with Arabidopsis	Similar to At5g21105: L-ascorbate oxidase/ copper ion binding / oxidoreductase (HF=2e-15)
Module size	6 genes
NF	0.22
%ile	40.5

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.48	75.4	0.86	PtpAffx.115064.1.A1_at	CV233955	l-ascorbate oxidase precursor	-	2e-15	At5g21105	L-ascorbate oxidase/ copper ion binding / oxidoreductase	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)
0.50	78.6	0.86	PtpAffx.224886.1.S1_x_at	pmrna43793	hypothetical protein	-	2e-6	At1g26240	proline-rich extensin-like family protein	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)
0.40	67.0	0.86	PtpAffx.225459.1.S1_x_at	pmrna44819	hypothetical protein	-	2e-14	At5g45160	root hair defective 3 GTP-binding (RHD3) family protein	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)
0.19	32.7	0.86	PtpAffx.212465.1.S1_at	pmrna24423	hypothetical protein	-	2e+0	At5g35945	unknown protein	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)
0.13	21.6	0.86	PtpAffx.208255.1.S1_at	pmrna16431	hypothetical protein	-	8e-38	At1g13460	serine/threonine protein phosphatase 2A (PP2A) regulatory subunit B', putative	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)
0.11	18.1	0.86	PtpAffx.208471.1.S1_at	pmrna16831	hypothetical protein	-	8e-22	At3g06850	BCE2	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
4.1	95.5	GSM327409	Populus balsamifera_1006_root_midday_3	GSE13990	Populus balsamifera developmental tissue series
3.7	94.7	GSM327407	Populus balsamifera_1006_root_midday_1	GSE13990	Populus balsamifera developmental tissue series
3.7	94.7	GSM327404	Populus balsamifera_1006_young_leaf_midday_1	GSE13990	Populus balsamifera developmental tissue series
2.3	89.8	GSM327408	Populus balsamifera_1006_root_midday_2	GSE13990	Populus balsamifera developmental tissue series
2.1	88.6	GSM372090	Clone3200_LPI2_N+_4w_rep2	GSE14893	Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 3200
2.1	88.6	GSM327405	Populus balsamifera_1006_young_leaf_midday_2	GSE13990	Populus balsamifera developmental tissue series
2.0	88.0	GSM372099	Clone3200_LPI5_N+_8w_rep1	GSE14893	Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 3200
2.0	88.0	GSM372097	Clone3200_LPI5_N-_8w_rep1	GSE14893	Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 3200
1.8	86.4	GSM372091	Clone3200_LPI2_N-_4w_rep1	GSE14893	Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 3200
1.7	85.5	GSM334224	Populus balsamifera_1006_mature_leaf_midday_1	GSE13990	Populus balsamifera developmental tissue series

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Triticum_aestivum

Vitis_vinifera

Zea_mays

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