Co-expression analysis

Gene ID PtpAffx.115064.1.A1_at
Gene name l-ascorbate oxidase precursor
Homology with ArabidopsisSimilar to At5g21105: L-ascorbate oxidase/ copper ion binding / oxidoreductase (HF=2e-15)
Module size 6 genes
NF 0.22
%ile 40.5

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.4875.40.86PtpAffx.115064.1.A1_atCV233955l-ascorbate oxidase precursor-2e-15At5g21105L-ascorbate oxidase/ copper ion binding / oxidoreductaseO.I.H.G.S.X.
0.5078.60.86PtpAffx.224886.1.S1_x_atpmrna43793hypothetical protein-2e-6At1g26240proline-rich extensin-like family proteinO.I.H.G.S.X.
0.4067.00.86PtpAffx.225459.1.S1_x_atpmrna44819hypothetical protein-2e-14At5g45160root hair defective 3 GTP-binding (RHD3) family proteinO.I.H.G.S.X.
0.1932.70.86PtpAffx.212465.1.S1_atpmrna24423hypothetical protein-2e+0At5g35945unknown proteinO.I.H.G.S.X.
0.1321.60.86PtpAffx.208255.1.S1_atpmrna16431hypothetical protein-8e-38At1g13460serine/threonine protein phosphatase 2A (PP2A) regulatory subunit B', putativeO.I.H.G.S.X.
0.1118.10.86PtpAffx.208471.1.S1_atpmrna16831hypothetical protein-8e-22At3g06850BCE2O.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
4.195.5GSM327409Populus balsamifera_1006_root_midday_3GSE13990Populus balsamifera developmental tissue seriesLink to GEO
3.794.7GSM327407Populus balsamifera_1006_root_midday_1GSE13990Populus balsamifera developmental tissue seriesLink to GEO
3.794.7GSM327404Populus balsamifera_1006_young_leaf_midday_1GSE13990Populus balsamifera developmental tissue seriesLink to GEO
2.389.8GSM327408Populus balsamifera_1006_root_midday_2GSE13990Populus balsamifera developmental tissue seriesLink to GEO
2.188.6GSM372090Clone3200_LPI2_N+_4w_rep2GSE14893Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 3200Link to GEO
2.188.6GSM327405Populus balsamifera_1006_young_leaf_midday_2GSE13990Populus balsamifera developmental tissue seriesLink to GEO
2.088.0GSM372099Clone3200_LPI5_N+_8w_rep1GSE14893Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 3200Link to GEO
2.088.0GSM372097Clone3200_LPI5_N-_8w_rep1GSE14893Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 3200Link to GEO
1.886.4GSM372091Clone3200_LPI2_N-_4w_rep1GSE14893Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 3200Link to GEO
1.785.5GSM334224Populus balsamifera_1006_mature_leaf_midday_1GSE13990Populus balsamifera developmental tissue seriesLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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