Co-expression analysis

Gene ID	PtpAffx.11491.1.S1_a_at
Gene name	aquaporin, MIP family, NIP subfamily /// hypothetical protein
Homology with Arabidopsis	Similar to At1g31885: transporter (HF=2e-6)
Module size	6 genes
NF	0.29
%ile	51.1

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.50	78.6	0.89	PtpAffx.11491.1.S1_a_at	DN496224	aquaporin, MIP family, NIP subfamily /// hypothetical protein	-	2e-6	At1g31885	transporter	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)
0.57	84.2	0.89	PtpAffx.160199.1.A1_at	CV242945	hypothetical protein	-	1e-47	At2g41540	GPDHC1	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)
0.44	71.9	0.91	PtpAffx.205927.1.S1_at	pmrna11762	hypothetical protein	-	5e-14	At5g47800	phototropic-responsive NPH3 family protein	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)
0.32	55.2	0.89	PtpAffx.33342.1.S1_at	AJ775605	hypothetical protein	-	3e-39	At2g43020	ATPAO2 (Polyamine oxidase 2)	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)
0.30	52.0	0.89	PtpAffx.92531.1.S1_s_at	DN500436	hypothetical protein	-	7e-5	At3g06150	unknown protein	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)
0.11	18.1	0.89	Ptp.4993.1.S1_at	CV278986	hypothetical protein	-	5e+0	At4g14147	ARPC4	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
9.1	98.7	GSM327657	Populus balsamifera_Female_Catkin_midday_2	GSE13990	Populus balsamifera developmental tissue series
8.8	98.7	GSM136936	Poplar in 1 x hrp + 0.25 % sucrose no bacteria	GSE5887	Pseudomonas aeruginosa PAO1 virulent genes in the poplar rhizosphere
5.1	96.8	GSM327659	Populus balsamifera_Male_Catkin_midday_1	GSE13990	Populus balsamifera developmental tissue series
4.2	95.6	GSM327661	Populus balsamifera_Male_Catkin_midday_3	GSE13990	Populus balsamifera developmental tissue series
4.1	95.5	GSM327660	Populus balsamifera_Male_Catkin_midday_2	GSE13990	Populus balsamifera developmental tissue series
3.5	94.3	GSM136938	Poplar contacted with P. aeruginosa PAO1 in 1 x hrp + 0.25 % sucrose	GSE5887	Pseudomonas aeruginosa PAO1 virulent genes in the poplar rhizosphere
3.5	94.3	GSM327407	Populus balsamifera_1006_root_midday_1	GSE13990	Populus balsamifera developmental tissue series
2.6	91.3	GSM327408	Populus balsamifera_1006_root_midday_2	GSE13990	Populus balsamifera developmental tissue series
2.6	91.3	GSM327658	Populus balsamifera_Female_Catkin_midday_3	GSE13990	Populus balsamifera developmental tissue series
2.5	90.9	GSM327656	Populus balsamifera_Female_Catkin_midday_1	GSE13990	Populus balsamifera developmental tissue series

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Triticum_aestivum

Vitis_vinifera

Zea_mays

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