Co-expression analysis

Gene ID PtpAffx.104716.1.S1_a_at
Gene name hypothetical protein
Homology with ArabidopsisSimilar to At4g16444: unknown protein (HF=3e-8)
Module size 6 genes
NF 0.59
%ile 89.0

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.9199.20.97PtpAffx.104716.1.S1_a_atCK096563hypothetical protein-3e-8At4g16444unknown proteinO.I.H.G.S.X.
0.6086.00.97Ptp.5782.1.S1_atCV271204hypothetical protein-2e-77At5g47200ATRAB1AO.I.H.G.S.X.
0.5582.20.97PtpAffx.159193.1.S1_atBU891642hypothetical protein-2e-18At5g23670LCB2O.I.H.G.S.X.
0.5078.60.97PtpAffx.5252.1.A1_atCV259090hypothetical protein-3e-61At3g22845emp24/gp25L/p24 protein-relatedO.I.H.G.S.X.
0.4471.90.97PtpAffx.454.7.A1_s_atCV281713hypothetical protein-2e-100At3g56800CAM3 (CALMODULIN 3)O.I.H.G.S.X.
0.2747.10.97PtpAffx.7182.3.A1_atCV253214--6e-3At1g79390unknown proteinO.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
7.698.3GSM327412Populus balsamifera_1006_differentiating_xylem_midday_2GSE13990Populus balsamifera developmental tissue seriesLink to GEO
5.897.4GSM327409Populus balsamifera_1006_root_midday_3GSE13990Populus balsamifera developmental tissue seriesLink to GEO
4.796.3GSM327411Populus balsamifera_1006_differentiating_xylem_midday_1GSE13990Populus balsamifera developmental tissue seriesLink to GEO
4.495.9GSM327408Populus balsamifera_1006_root_midday_2GSE13990Populus balsamifera developmental tissue seriesLink to GEO
3.894.9GSM327413Populus balsamifera_1006_differentiating_xylem_midday_3GSE13990Populus balsamifera developmental tissue seriesLink to GEO
3.694.5GSM327407Populus balsamifera_1006_root_midday_1GSE13990Populus balsamifera developmental tissue seriesLink to GEO
2.490.4GSM334226Populus balsamifera_1006_mature_leaf_midday_3GSE13990Populus balsamifera developmental tissue seriesLink to GEO
2.389.8GSM334225Populus balsamifera_1006_mature_leaf_midday_2GSE13990Populus balsamifera developmental tissue seriesLink to GEO
2.389.8GSM327400Populus balsamifera_20071015_Etiolated_seedling_6d_1GSE13990Populus balsamifera developmental tissue seriesLink to GEO
2.188.6GSM372090Clone3200_LPI2_N+_4w_rep2GSE14893Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 3200Link to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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