Co-expression analysis

Gene ID	PtpAffx.104568.1.S1_at
Gene name	hypothetical protein
Homology with Arabidopsis	Similar to At3g52900: unknown protein (HF=7e-12)
Module size	11 genes
NF	0.30
%ile	52.7

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.95	99.7	0.94	PtpAffx.104568.1.S1_at	BU894246	hypothetical protein	-	7e-12	At3g52900	unknown protein	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)
0.46	73.7	0.98	PtpAffx.18960.1.S1_at	CV230114	hypothetical protein	-	8e-19	At5g41140	unknown protein	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)
0.44	71.9	0.98	Ptp.216.1.A1_at	CK102827	hypothetical protein	-	2e+0	At5g36280	-	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)
0.38	63.7	0.93	PtpAffx.205667.1.S1_s_at	pmrna11187	hypothetical protein	-	2e-1	At4g10230	unknown protein	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)
0.32	55.2	0.98	Ptp.6565.1.S1_s_at	CV228306	hypothetical protein	-	5e-7	At3g15480	unknown protein	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)
0.30	52.0	0.98	Ptp.2698.1.S1_at	CK092327	-	-	2e-12	At5g15740	unknown protein	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)
0.29	50.5	0.98	Ptp.5517.2.A1_at	CV227636	hypothetical protein	-	2e+0	At5g03170	FLA11	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)
0.23	40.5	0.97	PtpAffx.213753.1.S1_at	pmrna26859	hypothetical protein	-	5e-25	At1g79620	leucine-rich repeat transmembrane protein kinase, putative	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)
0.22	38.3	0.97	Ptp.4684.1.S1_s_at	CV233522	tubulin, beta chain	-	0	At5g12250	TUB6 (BETA-6 TUBULIN)	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)
0.15	25.3	0.97	Ptp.4689.1.S1_at	CK093638	-	-	3e-21	At1g09610	unknown protein	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)
0.13	21.6	0.96	Ptp.1895.1.S1_at	AY229881.1	-	-	0	At1g50010	TUA2	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
4.5	96.1	GSM327413	Populus balsamifera_1006_differentiating_xylem_midday_3	GSE13990	Populus balsamifera developmental tissue series
4.4	95.9	GSM327661	Populus balsamifera_Male_Catkin_midday_3	GSE13990	Populus balsamifera developmental tissue series
4.3	95.8	GSM327412	Populus balsamifera_1006_differentiating_xylem_midday_2	GSE13990	Populus balsamifera developmental tissue series
4.0	95.3	GSM327411	Populus balsamifera_1006_differentiating_xylem_midday_1	GSE13990	Populus balsamifera developmental tissue series
3.6	94.5	GSM327657	Populus balsamifera_Female_Catkin_midday_2	GSE13990	Populus balsamifera developmental tissue series
2.8	92.1	GSM327656	Populus balsamifera_Female_Catkin_midday_1	GSE13990	Populus balsamifera developmental tissue series
2.3	89.8	GSM327658	Populus balsamifera_Female_Catkin_midday_3	GSE13990	Populus balsamifera developmental tissue series
2.0	88.0	GSM328070	Populus x canescens leaf control_rep_05	GSE13109	Effect of hypoxia on gene expression in Grey poplar
1.9	87.2	GSM327659	Populus balsamifera_Male_Catkin_midday_1	GSE13990	Populus balsamifera developmental tissue series
1.8	86.4	GSM328274	Populus x canescens leaf hypoxia_rep_02	GSE13109	Effect of hypoxia on gene expression in Grey poplar

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Triticum_aestivum

Vitis_vinifera

Zea_mays

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