Co-expression analysis

Gene ID PtpAffx.104568.1.S1_at
Gene name hypothetical protein
Homology with ArabidopsisSimilar to At3g52900: unknown protein (HF=7e-12)
Module size 11 genes
NF 0.30
%ile 52.7

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.9599.70.94PtpAffx.104568.1.S1_atBU894246hypothetical protein-7e-12At3g52900unknown proteinO.I.H.G.S.X.
0.4673.70.98PtpAffx.18960.1.S1_atCV230114hypothetical protein-8e-19At5g41140unknown proteinO.I.H.G.S.X.
0.4471.90.98Ptp.216.1.A1_atCK102827hypothetical protein-2e+0At5g36280-O.I.H.G.S.X.
0.3863.70.93PtpAffx.205667.1.S1_s_atpmrna11187hypothetical protein-2e-1At4g10230unknown proteinO.I.H.G.S.X.
0.3255.20.98Ptp.6565.1.S1_s_atCV228306hypothetical protein-5e-7At3g15480unknown proteinO.I.H.G.S.X.
0.3052.00.98Ptp.2698.1.S1_atCK092327--2e-12At5g15740unknown proteinO.I.H.G.S.X.
0.2950.50.98Ptp.5517.2.A1_atCV227636hypothetical protein-2e+0At5g03170FLA11O.I.H.G.S.X.
0.2340.50.97PtpAffx.213753.1.S1_atpmrna26859hypothetical protein-5e-25At1g79620leucine-rich repeat transmembrane protein kinase, putativeO.I.H.G.S.X.
0.2238.30.97Ptp.4684.1.S1_s_atCV233522tubulin, beta chain-0At5g12250TUB6 (BETA-6 TUBULIN)O.I.H.G.S.X.
0.1525.30.97Ptp.4689.1.S1_atCK093638--3e-21At1g09610unknown proteinO.I.H.G.S.X.
0.1321.60.96Ptp.1895.1.S1_atAY229881.1--0At1g50010TUA2O.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
4.596.1GSM327413Populus balsamifera_1006_differentiating_xylem_midday_3GSE13990Populus balsamifera developmental tissue seriesLink to GEO
4.495.9GSM327661Populus balsamifera_Male_Catkin_midday_3GSE13990Populus balsamifera developmental tissue seriesLink to GEO
4.395.8GSM327412Populus balsamifera_1006_differentiating_xylem_midday_2GSE13990Populus balsamifera developmental tissue seriesLink to GEO
4.095.3GSM327411Populus balsamifera_1006_differentiating_xylem_midday_1GSE13990Populus balsamifera developmental tissue seriesLink to GEO
3.694.5GSM327657Populus balsamifera_Female_Catkin_midday_2GSE13990Populus balsamifera developmental tissue seriesLink to GEO
2.892.1GSM327656Populus balsamifera_Female_Catkin_midday_1GSE13990Populus balsamifera developmental tissue seriesLink to GEO
2.389.8GSM327658Populus balsamifera_Female_Catkin_midday_3GSE13990Populus balsamifera developmental tissue seriesLink to GEO
2.088.0GSM328070Populus x canescens leaf control_rep_05GSE13109Effect of hypoxia on gene expression in Grey poplarLink to GEO
1.987.2GSM327659Populus balsamifera_Male_Catkin_midday_1GSE13990Populus balsamifera developmental tissue seriesLink to GEO
1.886.4GSM328274Populus x canescens leaf hypoxia_rep_02GSE13109Effect of hypoxia on gene expression in Grey poplarLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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