Co-expression analysis

Gene ID	Ptp.943.1.A1_at
Gene name	hypothetical protein
Homology with Arabidopsis	Similar to At1g26590: zinc finger (C2H2 type) family protein (HF=1e+0)
Module size	6 genes
NF	0.48
%ile	78.7

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.50	78.6	0.93	Ptp.943.1.A1_at	CK089617	hypothetical protein	-	1e+0	At1g26590	zinc finger (C2H2 type) family protein	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)
0.67	91.1	0.93	Ptp.122.1.S1_at	CK100070	-	-	2e-39	At4g22200	AKT2/3 (ARABIDOPSIS POTASSIUM TRANSPORT 2/3)	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)
0.67	91.1	0.93	PtpAffx.22589.1.A1_at	CV276606	hypothetical protein	-	2e+0	At3g01230	unknown protein	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)
0.50	78.6	0.93	PtpAffx.79920.1.A1_at	CK090376	hypothetical protein	-	1e+0	At5g59845	gibberellin-regulated family protein	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)
0.40	67.0	0.92	Ptp.484.1.S1_at	CX169919	hypothetical protein	-	6e-7	At5g50740	metal ion binding	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)
0.30	52.0	0.92	Ptp.3133.1.S1_s_at	DN490108	hypothetical protein	-	1e-24	At4g34980	SLP2	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
4.2	95.6	GSM362889	Clone1979_LPI5_N-_4w_rep1	GSE14515	Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 1979
3.7	94.7	GSM327661	Populus balsamifera_Male_Catkin_midday_3	GSE13990	Populus balsamifera developmental tissue series
3.3	93.7	GSM327656	Populus balsamifera_Female_Catkin_midday_1	GSE13990	Populus balsamifera developmental tissue series
2.8	92.1	GSM327658	Populus balsamifera_Female_Catkin_midday_3	GSE13990	Populus balsamifera developmental tissue series
2.5	90.9	GSM327657	Populus balsamifera_Female_Catkin_midday_2	GSE13990	Populus balsamifera developmental tissue series
2.4	90.4	GSM327281	Populus balsamifera_20071015_Seedling_continuous_light_6d_1	GSE13990	Populus balsamifera developmental tissue series
2.0	88.0	GSM327398	Populus balsamifera_20071015_Etiolated_seedling_6d_transfered_to_light_3h_3	GSE13990	Populus balsamifera developmental tissue series
1.9	87.2	GSM327358	Populus balsamifera_20071015_Seedling_continuous_light_6d_2	GSE13990	Populus balsamifera developmental tissue series
1.7	85.5	GSM327659	Populus balsamifera_Male_Catkin_midday_1	GSE13990	Populus balsamifera developmental tissue series
1.7	85.5	GSM362888	Clone1979_LPI5_N+_4w_rep2	GSE14515	Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 1979

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Triticum_aestivum

Vitis_vinifera

Zea_mays

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