Co-expression analysis

Gene ID Ptp.858.1.S1_at
Gene name hypothetical protein
Homology with ArabidopsisSimilar to At2g22240: MIPS2 (MYO-INOSITOL-1-PHOSTPATE SYNTHASE 2) (HF=4e-138)
Module size 6 genes
NF 0.35
%ile 60.8

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.7393.60.90Ptp.858.1.S1_atCV256345hypothetical protein-4e-138At2g22240MIPS2 (MYO-INOSITOL-1-PHOSTPATE SYNTHASE 2)O.I.H.G.S.X.
0.7192.60.90Ptp.858.1.S1_x_atCV256345hypothetical protein-4e-138At2g22240MIPS2 (MYO-INOSITOL-1-PHOSTPATE SYNTHASE 2)O.I.H.G.S.X.
0.5078.60.94PtpAffx.36446.1.A1_s_atCV280501hypothetical protein-1e-84At2g22240MIPS2 (MYO-INOSITOL-1-PHOSTPATE SYNTHASE 2)O.I.H.G.S.X.
0.3357.50.92PtpAffx.33063.1.A1_atCF120307hypothetical protein-2e-19At1g44170ALDH3H1 (ALDEHYDE DEHYDROGENASE 3H1)O.I.H.G.S.X.
0.1729.10.89PtpAffx.50938.1.A1_s_atCK317898hypothetical protein-1e-14At4g14550IAA14 (INDOLE-3-ACETIC ACID INDUCIBLE 14)O.I.H.G.S.X.
0.1729.10.90Ptp.3635.1.S1_s_atCV243719hypothetical protein-1e-54At3g17760GAD5 (glutamate decarboxylase 5)O.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
4.596.1GSM328066Populus x canescens leaf control_rep_04GSE13109Effect of hypoxia on gene expression in Grey poplarLink to GEO
4.596.1GSM328059Populus x canescens leaf control_rep_01GSE13109Effect of hypoxia on gene expression in Grey poplarLink to GEO
4.495.9GSM328070Populus x canescens leaf control_rep_05GSE13109Effect of hypoxia on gene expression in Grey poplarLink to GEO
4.395.8GSM328105Populus x canescens leaf hypoxia_rep_01GSE13109Effect of hypoxia on gene expression in Grey poplarLink to GEO
3.694.5GSM328275Populus x canescens leaf hypoxia_rep_03GSE13109Effect of hypoxia on gene expression in Grey poplarLink to GEO
3.694.5GSM328077Populus x canescens leaf control_rep_06GSE13109Effect of hypoxia on gene expression in Grey poplarLink to GEO
3.594.3GSM328274Populus x canescens leaf hypoxia_rep_02GSE13109Effect of hypoxia on gene expression in Grey poplarLink to GEO
3.594.3GSM362890Clone1979_LPI5_N-_4w_rep2GSE14515Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 1979Link to GEO
3.494.0GSM328062Populus x canescens leaf control_rep_02GSE13109Effect of hypoxia on gene expression in Grey poplarLink to GEO
3.393.7GSM372044Clone1979_LPI5_N+_8w_rep1GSE14515Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 1979Link to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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