Co-expression analysis

Gene ID	Ptp.857.1.S1_at
Gene name	hypothetical protein
Homology with Arabidopsis	Similar to At1g62770: invertase/pectin methylesterase inhibitor family protein (HF=4e-1)
Module size	6 genes
NF	0.91
%ile	99.9

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.91	99.2	0.98	Ptp.857.1.S1_at	CK089982	hypothetical protein	-	4e-1	At1g62770	invertase/pectin methylesterase inhibitor family protein	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)
0.91	99.2	0.97	Ptp.110.1.S1_at	AY435100.1	hypothetical protein	-	5e-26	At2g40610	ATEXPA8 (ARABIDOPSIS THALIANA EXPANSIN A8)	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)
0.91	99.2	0.97	Ptp.6225.1.S1_at	DN500518	hypothetical protein	-	3e-2	At1g22370	AtUGT85A5 (UDP-glucosyl transferase 85A5)	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)
0.83	97.0	0.96	Ptp.1099.1.A1_at	CK089787	GH3 family protein /// GH3 family protein	-	6e-2	At4g03400	DFL2 (DWARF IN LIGHT 2)	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)
0.83	97.0	0.96	Ptp.7888.1.S1_at	DN500883	hypothetical protein	-	6e-1	At2g33590	cinnamoyl-CoA reductase family	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)
0.61	87.0	0.97	PtpAffx.78712.2.S1_a_at	BI068872	hypothetical protein	-	1e+0	At5g65390	AGP7	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
3.0	92.9	GSM328059	Populus x canescens leaf control_rep_01	GSE13109	Effect of hypoxia on gene expression in Grey poplar
2.7	91.8	GSM328062	Populus x canescens leaf control_rep_02	GSE13109	Effect of hypoxia on gene expression in Grey poplar
2.5	90.9	GSM328105	Populus x canescens leaf hypoxia_rep_01	GSE13109	Effect of hypoxia on gene expression in Grey poplar
2.4	90.4	GSM328066	Populus x canescens leaf control_rep_04	GSE13109	Effect of hypoxia on gene expression in Grey poplar
2.2	89.3	GSM328275	Populus x canescens leaf hypoxia_rep_03	GSE13109	Effect of hypoxia on gene expression in Grey poplar
2.2	89.3	GSM328281	Populus x canescens root control_rep_02	GSE13109	Effect of hypoxia on gene expression in Grey poplar
2.2	89.3	GSM328063	Populus x canescens leaf control_rep_03	GSE13109	Effect of hypoxia on gene expression in Grey poplar
2.0	88.0	GSM328558	Populus x canescens root control_rep_09	GSE13109	Effect of hypoxia on gene expression in Grey poplar
2.0	88.0	GSM328292	Populus x canescens root control_rep_05	GSE13109	Effect of hypoxia on gene expression in Grey poplar
1.9	87.2	GSM328277	Populus x canescens root control_rep_01	GSE13109	Effect of hypoxia on gene expression in Grey poplar

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Triticum_aestivum

Vitis_vinifera

Zea_mays

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