Co-expression analysis

Gene ID	Ptp.820.1.A1_at
Gene name	hypothetical protein
Homology with Arabidopsis	Similar to At1g18070: EF-1-alpha-related GTP-binding protein, putative (HF=6e-13)
Module size	7 genes
NF	0.53
%ile	83.7

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.39	64.6	0.97	Ptp.820.1.A1_at	BI068635	hypothetical protein	-	6e-13	At1g18070	EF-1-alpha-related GTP-binding protein, putative	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)
0.75	94.1	0.97	PtpAffx.13176.5.S1_at	CF232111	hypothetical protein	-	6e+0	At5g11080	ubiquitin family protein	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)
0.67	91.1	0.97	Ptp.1741.1.A1_at	CK093530	hypothetical protein	-	1e+0	At1g72660	developmentally regulated GTP-binding protein, putative	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)
0.57	84.2	0.97	Ptp.5796.1.S1_at	CK087882	-	-	1e+0	At4g04190	unknown protein	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)
0.48	75.4	0.97	PtpAffx.28224.2.S1_a_at	DN490078	hypothetical protein	-	2e-78	At2g32260	cholinephosphate cytidylyltransferase, putative / phosphorylcholine transferase, putative / CTP:phosphocholine cytidylyltransferase, putative	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)
0.43	69.7	0.97	Ptp.6987.1.S1_at	DN489050	-	-	2e+0	At1g32370	TOM2B (TOBAMOVIRUS MULTIPLICATION 2B)	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)
0.40	67.0	0.97	Ptp.6871.1.S1_at	BU830941	hypothetical protein	-	1e+0	At4g34190	SEP1 (STRESS ENHANCED PROTEIN 1)	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
3.4	94.0	GSM327403	Populus balsamifera_20071015_Etiolated_seedling_6d_3	GSE13990	Populus balsamifera developmental tissue series
3.1	93.2	GSM328066	Populus x canescens leaf control_rep_04	GSE13109	Effect of hypoxia on gene expression in Grey poplar
3.0	92.9	GSM327400	Populus balsamifera_20071015_Etiolated_seedling_6d_1	GSE13990	Populus balsamifera developmental tissue series
2.5	90.9	GSM244430	non infected tissue, biological rep1	GSE9673	Comparative transcriptomic reveals signatures specific to various interactions with Melampsora rust fungi
2.5	90.9	GSM328105	Populus x canescens leaf hypoxia_rep_01	GSE13109	Effect of hypoxia on gene expression in Grey poplar
2.3	89.8	GSM328077	Populus x canescens leaf control_rep_06	GSE13109	Effect of hypoxia on gene expression in Grey poplar
2.1	88.6	GSM327380	Populus balsamifera_20071015_Etiolated_seedling_6d_transfered_to_light_3h_1	GSE13990	Populus balsamifera developmental tissue series
2.0	88.0	GSM327402	Populus balsamifera_20071015_Etiolated_seedling_6d_2	GSE13990	Populus balsamifera developmental tissue series
2.0	88.0	GSM328059	Populus x canescens leaf control_rep_01	GSE13109	Effect of hypoxia on gene expression in Grey poplar
1.9	87.2	GSM327398	Populus balsamifera_20071015_Etiolated_seedling_6d_transfered_to_light_3h_3	GSE13990	Populus balsamifera developmental tissue series

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Triticum_aestivum

Vitis_vinifera

Zea_mays

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