Co-expression analysis

Gene ID	Ptp.8055.1.S1_at
Gene name	hypothetical protein
Homology with Arabidopsis	Similar to At2g24050: MIF4G domain-containing protein / MA3 domain-containing protein (HF=4e-12)
Module size	6 genes
NF	0.68
%ile	95.2

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.67	91.1	0.96	Ptp.8055.1.S1_at	CV231079	hypothetical protein	-	4e-12	At2g24050	MIF4G domain-containing protein / MA3 domain-containing protein	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)
0.80	96.0	0.96	Ptp.3097.1.S1_s_at	CV263536	hypothetical protein	-	2e-12	At3g08530	clathrin heavy chain, putative	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)
0.67	91.1	0.97	PtpAffx.221613.1.S1_s_at	pmrna38584	hypothetical protein	-	2e-110	At1g79940	ATERDJ2A	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)
0.55	82.2	0.96	PtpAffx.56167.2.A1_a_at	CV257060	hypothetical protein	-	3e+0	At4g13060	F-box family protein-related	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)
0.53	80.5	0.97	PtpAffx.1389.1.S1_at	CV247128	hypothetical protein	-	1e-100	At3g43810	CAM7 (CALMODULIN 7)	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)
0.50	78.6	0.97	PtpAffx.48763.2.S1_a_at	CV230971	hypothetical protein	-	3e-11	At1g51200	zinc finger (AN1-like) family protein	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
7.0	98.0	GSM327411	Populus balsamifera_1006_differentiating_xylem_midday_1	GSE13990	Populus balsamifera developmental tissue series
5.4	97.0	GSM327412	Populus balsamifera_1006_differentiating_xylem_midday_2	GSE13990	Populus balsamifera developmental tissue series
4.5	96.1	GSM327413	Populus balsamifera_1006_differentiating_xylem_midday_3	GSE13990	Populus balsamifera developmental tissue series
3.4	94.0	GSM327661	Populus balsamifera_Male_Catkin_midday_3	GSE13990	Populus balsamifera developmental tissue series
2.2	89.3	GSM327656	Populus balsamifera_Female_Catkin_midday_1	GSE13990	Populus balsamifera developmental tissue series
2.1	88.6	GSM327659	Populus balsamifera_Male_Catkin_midday_1	GSE13990	Populus balsamifera developmental tissue series
1.6	84.5	GSM327657	Populus balsamifera_Female_Catkin_midday_2	GSE13990	Populus balsamifera developmental tissue series
1.5	83.5	GSM327407	Populus balsamifera_1006_root_midday_1	GSE13990	Populus balsamifera developmental tissue series
1.5	83.5	GSM327409	Populus balsamifera_1006_root_midday_3	GSE13990	Populus balsamifera developmental tissue series
1.5	83.5	GSM327400	Populus balsamifera_20071015_Etiolated_seedling_6d_1	GSE13990	Populus balsamifera developmental tissue series

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Triticum_aestivum

Vitis_vinifera

Zea_mays

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