Co-expression analysis

Gene ID	Ptp.797.1.S1_at
Gene name	argonaute protein group
Homology with Arabidopsis	Similar to At1g48410: AGO1 (ARGONAUTE 1) (HF=2e-52)
Module size	7 genes
NF	0.61
%ile	91.2

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.60	86.0	0.96	Ptp.797.1.S1_at	BU886963	argonaute protein group	-	2e-52	At1g48410	AGO1 (ARGONAUTE 1)	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)
0.86	97.4	0.97	PtpAffx.13499.1.S1_at	CK104585	multidrug resistance protein ABC transporter family	-	8e-28	At1g04120	ATMRP5	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)
0.73	93.6	0.97	Ptp.1335.1.S1_at	CK092974	-	-	6e+0	At5g64230	unknown protein	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)
0.61	87.0	0.97	PtpAffx.34515.1.S1_at	CK096559	cc-nbs-lrr resistance protein /// nbs-lrr resistance protein /// cc-nbs-lrr resistance protein /// hypothetical protein /// cc-nbs-lrr resistance protein /// cc-nbs-lrr resistance protein /// cc-nbs-lrr resistance protein	-	3e+0	At3g51210	flavonol 3-sulfotransferase-related	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)
0.50	78.6	0.97	Ptp.4870.1.S1_at	BU810859	-	-	5e-5	At3g61790	seven in absentia (SINA) family protein	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)
0.40	67.0	0.97	Ptp.2302.1.S1_at	BU871113	hypothetical protein	-	6e-6	At4g34110	PAB2 (POLY(A) BINDING 2)	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)
0.36	61.6	0.98	PtpAffx.13767.1.S1_at	BU870339	-	-	3e-1	At3g22275	unknown protein	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
4.5	96.1	GSM328567	Populus x canescens root hypoxia_rep_09	GSE13109	Effect of hypoxia on gene expression in Grey poplar
4.1	95.5	GSM328564	Populus x canescens root hypoxia_rep_06	GSE13109	Effect of hypoxia on gene expression in Grey poplar
3.7	94.7	GSM328565	Populus x canescens root hypoxia_rep_07	GSE13109	Effect of hypoxia on gene expression in Grey poplar
2.4	90.4	GSM327413	Populus balsamifera_1006_differentiating_xylem_midday_3	GSE13990	Populus balsamifera developmental tissue series
2.4	90.4	GSM327412	Populus balsamifera_1006_differentiating_xylem_midday_2	GSE13990	Populus balsamifera developmental tissue series
2.3	89.8	GSM328562	Populus x canescens root hypoxia_rep_04	GSE13109	Effect of hypoxia on gene expression in Grey poplar
2.2	89.3	GSM327411	Populus balsamifera_1006_differentiating_xylem_midday_1	GSE13990	Populus balsamifera developmental tissue series
2.1	88.6	GSM362887	Clone1979_LPI5_N+_4w_rep1	GSE14515	Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 1979
2.0	88.0	GSM328292	Populus x canescens root control_rep_05	GSE13109	Effect of hypoxia on gene expression in Grey poplar
2.0	88.0	GSM327657	Populus balsamifera_Female_Catkin_midday_2	GSE13990	Populus balsamifera developmental tissue series

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Triticum_aestivum

Vitis_vinifera

Zea_mays

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