Co-expression analysis

Gene ID Ptp.788.1.S1_at
Gene name hypothetical protein
Homology with ArabidopsisSimilar to At4g38240: CGL1 (COMPLEX GLYCAN LESS 1) (HF=2e-38)
Module size 7 genes
NF 0.37
%ile 63.2

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.6388.10.94Ptp.788.1.S1_atCK089255hypothetical protein-2e-38At4g38240CGL1 (COMPLEX GLYCAN LESS 1)O.I.H.G.S.X.
0.6086.00.94Ptp.1730.1.A1_atCK093317--5e+0At5g62330-O.I.H.G.S.X.
0.4268.60.93Ptp.607.1.S1_atCK087237hypothetical protein-1e-17At5g54680ILR3 (iaa-leucine resistant3)O.I.H.G.S.X.
0.3153.70.94PtpAffx.78728.1.S1_atDN495875--3e+0Atmg01120-O.I.H.G.S.X.
0.2850.50.94PtpAffx.78103.1.A1_atCF228445--3e+0At4g02425unknown proteinO.I.H.G.S.X.
0.2238.30.94PtpAffx.35480.1.S1_atBU837763hypothetical protein-8e-11At1g18160protein kinase family proteinO.I.H.G.S.X.
0.2136.50.95Ptp.6388.1.S1_atBI128431hypothetical protein-6e-9At2g42500PP2A-4O.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
10.599.0GSM327412Populus balsamifera_1006_differentiating_xylem_midday_2GSE13990Populus balsamifera developmental tissue seriesLink to GEO
3.594.3GSM327411Populus balsamifera_1006_differentiating_xylem_midday_1GSE13990Populus balsamifera developmental tissue seriesLink to GEO
3.092.9GSM328105Populus x canescens leaf hypoxia_rep_01GSE13109Effect of hypoxia on gene expression in Grey poplarLink to GEO
2.892.1GSM328062Populus x canescens leaf control_rep_02GSE13109Effect of hypoxia on gene expression in Grey poplarLink to GEO
2.590.9GSM244437Mmd infected tissue, biological rep2GSE9673Comparative transcriptomic reveals signatures specific to various interactions with Melampsora rust fungiLink to GEO
2.389.8GSM327660Populus balsamifera_Male_Catkin_midday_2GSE13990Populus balsamifera developmental tissue seriesLink to GEO
2.289.3GSM327413Populus balsamifera_1006_differentiating_xylem_midday_3GSE13990Populus balsamifera developmental tissue seriesLink to GEO
2.088.0GSM328532Populus x canescens root hypoxia_rep_02GSE13109Effect of hypoxia on gene expression in Grey poplarLink to GEO
2.088.0GSM328066Populus x canescens leaf control_rep_04GSE13109Effect of hypoxia on gene expression in Grey poplarLink to GEO
2.088.0GSM244432non infected tissue, biological rep3GSE9673Comparative transcriptomic reveals signatures specific to various interactions with Melampsora rust fungiLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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