Co-expression analysis

Gene ID Ptp.7815.1.A1_at
Gene name hypothetical protein
Homology with ArabidopsisSimilar to At2g19360: unknown protein (HF=1e-1)
Module size 21 genes
NF 0.47
%ile 77.4

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.7091.70.94Ptp.7815.1.A1_atCX185861hypothetical protein-1e-1At2g19360unknown proteinO.I.H.G.S.X.
0.6991.50.96PtpAffx.4277.1.S1_a_atCV265521--1e-131At3g02520GRF7 (GENERAL REGULATORY FACTOR 7)O.I.H.G.S.X.
0.6187.00.97Ptp.5444.1.S1_x_atBU869351hypothetical protein-6e-121At5g20010RAN-1O.I.H.G.S.X.
0.6187.00.96PtpAffx.206347.1.S1_atpmrna12600hypothetical protein-2e-4At3g51650unknown proteinO.I.H.G.S.X.
0.5984.90.96PtpAffx.249.18.A1_x_atBP931138--3e-77At4g02890UBQ14O.I.H.G.S.X.
0.5380.50.97Ptp.7476.1.A1_s_atCK111860hypothetical protein-4e-42At1g20110zinc finger (FYVE type) family proteinO.I.H.G.S.X.
0.5078.60.95PtpAffx.150481.1.S1_atCK105112hypothetical protein-2e-12At5g43930transducin family protein / WD-40 repeat family proteinO.I.H.G.S.X.
0.5078.60.96PtpAffx.1258.4.S1_s_atCF232778actin 1 /// actin 9-0At5g09810ACT7 (ACTIN 7)O.I.H.G.S.X.
0.4673.70.95PtpAffx.12342.2.S1_s_atCV256206aquaporin, MIP family, PIP subfamily-4e-73At4g23400PIP1O.I.H.G.S.X.
0.4673.70.97Ptp.5592.1.S1_atAF272572.1hypothetical protein-5e-82At5g38480GRF3 (GENERAL REGULATORY FACTOR 3)O.I.H.G.S.X.
0.4673.70.96PtpAffx.215548.1.S1_x_atpmrna29808hypothetical protein-9e-74Atcg00670-O.I.H.G.S.X.
0.4471.90.97Ptp.2453.1.S1_atCV284013hypothetical protein-2e-28At5g52240MSBP1 (membrane steroid binding protein 1)O.I.H.G.S.X.
0.4369.70.97Ptp.4943.1.S1_atCV249629hypothetical protein-2e-99At1g20090ROP2 (RHO-RELATED PROTEIN FROM PLANTS 2)O.I.H.G.S.X.
0.4268.60.96PtpAffx.43571.1.S1_atBU812831hypothetical protein-2e-23At2g39630glycosyl transferase family 2 proteinO.I.H.G.S.X.
0.4167.70.96Ptp.2488.1.S1_x_atCV234562hypothetical protein-2e-89At5g41700UBC8 (UBIQUITIN CONJUGATING ENZYME 8)O.I.H.G.S.X.
0.4067.00.96PtpAffx.29211.1.S1_s_atCK317782hypothetical protein-3e-8At4g34210ASK11 (ARABIDOPSIS SKP1-LIKE 11)O.I.H.G.S.X.
0.3964.60.96Ptp.2488.1.S1_atCV234562hypothetical protein-2e-89At5g41700UBC8 (UBIQUITIN CONJUGATING ENZYME 8)O.I.H.G.S.X.
0.3964.60.96PtpAffx.93020.1.S1_atDN491626hypothetical protein-2e-12At4g02550unknown proteinO.I.H.G.S.X.
0.3357.50.96PtpAffx.5370.1.S1_atCF232895hypothetical protein-6e-24At3g48570protein transport protein SEC61 gamma subunit, putativeO.I.H.G.S.X.
0.3357.50.96Ptp.4306.1.S1_atCV225469hypothetical protein-5e-78At5g53300UBC10 (ubiquitin-conjugating enzyme 10)O.I.H.G.S.X.
0.3357.50.97PtpAffx.4784.1.A1_s_atCV268464hypothetical protein-8e+0At5g27290unknown proteinO.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
3.694.5GSM327404Populus balsamifera_1006_young_leaf_midday_1GSE13990Populus balsamifera developmental tissue seriesLink to GEO
2.791.8GSM327408Populus balsamifera_1006_root_midday_2GSE13990Populus balsamifera developmental tissue seriesLink to GEO
2.490.4GSM327409Populus balsamifera_1006_root_midday_3GSE13990Populus balsamifera developmental tissue seriesLink to GEO
2.490.4GSM328564Populus x canescens root hypoxia_rep_06GSE13109Effect of hypoxia on gene expression in Grey poplarLink to GEO
2.289.3GSM327661Populus balsamifera_Male_Catkin_midday_3GSE13990Populus balsamifera developmental tissue seriesLink to GEO
2.289.3GSM327411Populus balsamifera_1006_differentiating_xylem_midday_1GSE13990Populus balsamifera developmental tissue seriesLink to GEO
2.188.6GSM327407Populus balsamifera_1006_root_midday_1GSE13990Populus balsamifera developmental tissue seriesLink to GEO
1.785.5GSM327413Populus balsamifera_1006_differentiating_xylem_midday_3GSE13990Populus balsamifera developmental tissue seriesLink to GEO
1.785.5GSM327412Populus balsamifera_1006_differentiating_xylem_midday_2GSE13990Populus balsamifera developmental tissue seriesLink to GEO
1.684.5GSM328565Populus x canescens root hypoxia_rep_07GSE13109Effect of hypoxia on gene expression in Grey poplarLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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