Co-expression analysis

Gene ID Ptp.7603.1.S1_at
Gene name
Homology with ArabidopsisSimilar to At1g31120: KUP10 (HF=6e-2)
Module size 6 genes
NF 0.36
%ile 62.3

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.6791.10.94Ptp.7603.1.S1_atDN494879--6e-2At1g31120KUP10O.I.H.G.S.X.
0.4067.00.94PtpAffx.54760.1.A1_atDN488946hypothetical protein-3e-11At5g28020CYSD2 (CYSTEINE SYNTHASE D2)O.I.H.G.S.X.
0.3559.70.94Ptp.6822.1.S1_atDN500216--5e+0At5g26740unknown proteinO.I.H.G.S.X.
0.3357.50.95PtpAffx.77707.1.A1_atCK097241--4e-1At1g33910avirulence-responsive family protein / avirulence induced gene (AIG1) family proteinO.I.H.G.S.X.
0.2238.30.95Ptp.6461.1.A1_atCX282788hypothetical protein-3e-50At1g47830clathrin coat assembly protein, putativeO.I.H.G.S.X.
0.2034.60.94PtpAffx.135916.1.A1_atCK096317hypothetical protein-4e-8At4g35530phosphatidylinositolglycan-relatedO.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
5.797.3GSM328564Populus x canescens root hypoxia_rep_06GSE13109Effect of hypoxia on gene expression in Grey poplarLink to GEO
5.396.9GSM328105Populus x canescens leaf hypoxia_rep_01GSE13109Effect of hypoxia on gene expression in Grey poplarLink to GEO
4.996.5GSM328567Populus x canescens root hypoxia_rep_09GSE13109Effect of hypoxia on gene expression in Grey poplarLink to GEO
4.395.8GSM328565Populus x canescens root hypoxia_rep_07GSE13109Effect of hypoxia on gene expression in Grey poplarLink to GEO
3.494.0GSM328062Populus x canescens leaf control_rep_02GSE13109Effect of hypoxia on gene expression in Grey poplarLink to GEO
2.992.5GSM328562Populus x canescens root hypoxia_rep_04GSE13109Effect of hypoxia on gene expression in Grey poplarLink to GEO
2.992.5GSM328284Populus x canescens root control_rep_03GSE13109Effect of hypoxia on gene expression in Grey poplarLink to GEO
2.892.1GSM328066Populus x canescens leaf control_rep_04GSE13109Effect of hypoxia on gene expression in Grey poplarLink to GEO
2.691.3GSM328563Populus x canescens root hypoxia_rep_05GSE13109Effect of hypoxia on gene expression in Grey poplarLink to GEO
2.590.9GSM328560Populus x canescens root control_rep_11GSE13109Effect of hypoxia on gene expression in Grey poplarLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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