Co-expression analysis

Gene ID	Ptp.7073.2.S1_at
Gene name	hypothetical protein
Homology with Arabidopsis	Similar to At1g68300: universal stress protein (USP) family protein (HF=8e-2)
Module size	7 genes
NF	0.05
%ile	11.3

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.73	93.6	0.76	Ptp.7073.2.S1_at	BU836555	hypothetical protein	-	8e-2	At1g68300	universal stress protein (USP) family protein	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)
0.11	18.1	0.83	PtpAffx.207433.1.S1_at	pmrna14756	1-aminocyclopropane-1-carboxylate	-	1e-30	At3g49700	ACS9 (1-AMINOCYCLOPROPANE-1-CARBOXYLATE SYNTHASE 9)	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)
0.11	18.1	0.83	PtpAffx.219046.1.S1_at	pmrna34844	cytochrome P450	-	9e-2	At5g60530	late embryogenesis abundant protein-related / LEA protein-related	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)
0.08	12.9	0.84	PtpAffx.201560.1.S1_at	pmrna3064	hypothetical protein	-	8e-1	At5g49990	xanthine/uracil permease family protein	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)
0.07	11.6	0.84	PtpAffx.60325.1.S1_at	BU819266	hypothetical protein	-	1e+0	At5g41720	-	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)
0.02	3.6	0.83	PtpAffx.206437.1.S1_at	pmrna12777	calcium dependent protein kinase 26	-	6e-42	At5g04870	CPK1 (CALCIUM DEPENDENT PROTEIN KINASE 1)	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)
0.02	3.6	0.83	PtpAffx.29098.1.S1_at	BU865994	-	-	2e+0	At3g19920	unknown protein	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
2.5	90.9	GSM372089	Clone3200_LPI2_N+_4w_rep1	GSE14893	Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 3200
2.4	90.4	GSM327661	Populus balsamifera_Male_Catkin_midday_3	GSE13990	Populus balsamifera developmental tissue series
2.3	89.8	GSM372099	Clone3200_LPI5_N+_8w_rep1	GSE14893	Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 3200
2.2	89.3	GSM327656	Populus balsamifera_Female_Catkin_midday_1	GSE13990	Populus balsamifera developmental tissue series
1.9	87.2	GSM372093	Clone3200_LPI5_N+_4w_rep1	GSE14893	Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 3200
1.9	87.2	GSM327404	Populus balsamifera_1006_young_leaf_midday_1	GSE13990	Populus balsamifera developmental tissue series
1.8	86.4	GSM372091	Clone3200_LPI2_N-_4w_rep1	GSE14893	Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 3200
1.8	86.4	GSM362886	Clone1979_LPI2_N-_4w_rep2	GSE14515	Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 1979
1.7	85.5	GSM362887	Clone1979_LPI5_N+_4w_rep1	GSE14515	Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 1979
1.7	85.5	GSM362884	Clone1979_LPI2_N+_4w_rep2	GSE14515	Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 1979

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Triticum_aestivum

Vitis_vinifera

Zea_mays

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