Co-expression analysis

Gene ID	Ptp.7049.1.S1_at
Gene name	hypothetical protein
Homology with Arabidopsis	Similar to At1g73120: unknown protein (HF=2e-2)
Module size	6 genes
NF	0.70
%ile	96.3

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.67	91.1	0.95	Ptp.7049.1.S1_at	DN498757	hypothetical protein	-	2e-2	At1g73120	unknown protein	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)
0.83	97.0	0.91	Ptp.3979.1.S1_at	DN489014	hypothetical protein	-	2e+0	At5g23590	DNAJ heat shock N-terminal domain-containing protein	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)
0.67	91.1	0.92	PtpAffx.205355.1.S1_at	pmrna10601	hypothetical protein	-	6e-13	At3g50330	HEC2 (HECATE 2)	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)
0.67	91.1	0.92	PtpAffx.213510.1.S1_at	pmrna26410	SAUR family protein	-	3e-11	At2g37030	auxin-responsive family protein	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)
0.50	78.6	0.94	PtpAffx.207964.1.S1_at	pmrna15812	hypothetical protein	-	6e+0	At5g42785	unknown protein	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)
0.46	73.7	0.92	PtpAffx.223979.1.S1_s_at	pmrna42205	hypothetical protein	-	3e+0	At5g56420	F-box family protein	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
7.1	98.1	GSM327380	Populus balsamifera_20071015_Etiolated_seedling_6d_transfered_to_light_3h_1	GSE13990	Populus balsamifera developmental tissue series
5.2	96.8	GSM327660	Populus balsamifera_Male_Catkin_midday_2	GSE13990	Populus balsamifera developmental tissue series
3.6	94.5	GSM327402	Populus balsamifera_20071015_Etiolated_seedling_6d_2	GSE13990	Populus balsamifera developmental tissue series
3.1	93.2	GSM327398	Populus balsamifera_20071015_Etiolated_seedling_6d_transfered_to_light_3h_3	GSE13990	Populus balsamifera developmental tissue series
2.7	91.8	GSM362888	Clone1979_LPI5_N+_4w_rep2	GSE14515	Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 1979
2.5	90.9	GSM328563	Populus x canescens root hypoxia_rep_05	GSE13109	Effect of hypoxia on gene expression in Grey poplar
2.5	90.9	GSM327397	Populus balsamifera_20071015_Etiolated_seedling_6d_transfered_to_light_3h_2	GSE13990	Populus balsamifera developmental tissue series
2.3	89.8	GSM327400	Populus balsamifera_20071015_Etiolated_seedling_6d_1	GSE13990	Populus balsamifera developmental tissue series
1.8	86.4	GSM328566	Populus x canescens root hypoxia_rep_08	GSE13109	Effect of hypoxia on gene expression in Grey poplar
1.7	85.5	GSM328483	Populus x canescens root control_rep_06	GSE13109	Effect of hypoxia on gene expression in Grey poplar

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Triticum_aestivum

Vitis_vinifera

Zea_mays

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