Co-expression analysis

Gene ID	Ptp.6966.1.S1_s_at
Gene name
Homology with Arabidopsis	Similar to At5g14030: translocon-associated protein beta (TRAPB) family protein (HF=4e-14)
Module size	6 genes
NF	0.73
%ile	97.4

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.57	84.2	0.96	Ptp.6966.1.S1_s_at	CV239698	-	-	4e-14	At5g14030	translocon-associated protein beta (TRAPB) family protein	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)
0.91	99.2	0.97	PtpAffx.4942.2.S1_s_at	CV236355	hypothetical protein	-	1e-11	At2g21160	translocon-associated protein alpha (TRAP alpha) family protein	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)
0.67	91.1	0.97	Ptp.746.1.A1_at	CV251238	hypothetical protein	-	3e-2	At2g16595	-	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)
0.67	91.1	0.98	PtpAffx.450.1.S1_at	CK318302	hypothetical protein	-	2e-72	At5g50850	MAB1 (MACCI-BOU)	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)
0.67	91.1	0.98	PtpAffx.11912.1.S1_at	CV247192	hypothetical protein	-	2e-34	At3g07680	emp24/gp25L/p24 family protein	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)
0.57	84.2	0.97	PtpAffx.13016.1.S1_s_at	CV273742	hypothetical protein	-	2e-46	At1g09330	unknown protein	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
5.0	96.6	GSM327412	Populus balsamifera_1006_differentiating_xylem_midday_2	GSE13990	Populus balsamifera developmental tissue series
4.4	95.9	GSM327658	Populus balsamifera_Female_Catkin_midday_3	GSE13990	Populus balsamifera developmental tissue series
4.3	95.8	GSM327404	Populus balsamifera_1006_young_leaf_midday_1	GSE13990	Populus balsamifera developmental tissue series
4.0	95.3	GSM327411	Populus balsamifera_1006_differentiating_xylem_midday_1	GSE13990	Populus balsamifera developmental tissue series
3.9	95.1	GSM327413	Populus balsamifera_1006_differentiating_xylem_midday_3	GSE13990	Populus balsamifera developmental tissue series
3.3	93.7	GSM362888	Clone1979_LPI5_N+_4w_rep2	GSE14515	Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 1979
2.9	92.5	GSM327661	Populus balsamifera_Male_Catkin_midday_3	GSE13990	Populus balsamifera developmental tissue series
2.7	91.8	GSM372089	Clone3200_LPI2_N+_4w_rep1	GSE14893	Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 3200
2.6	91.3	GSM327660	Populus balsamifera_Male_Catkin_midday_2	GSE13990	Populus balsamifera developmental tissue series
2.3	89.8	GSM362883	Clone1979_LPI2_N+_4w_rep1	GSE14515	Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 1979

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Triticum_aestivum

Vitis_vinifera

Zea_mays

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