Co-expression analysis

Gene ID	Ptp.6875.1.S1_s_at
Gene name	hypothetical protein
Homology with Arabidopsis	Similar to At1g31812: ACBP6 (acyl-CoA-binding protein 6) (HF=1e-22)
Module size	6 genes
NF	0.61
%ile	90.9

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.91	99.2	0.95	Ptp.6875.1.S1_s_at	CV234546	hypothetical protein	-	1e-22	At1g31812	ACBP6 (acyl-CoA-binding protein 6)	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)
0.55	82.2	0.93	PtpAffx.212328.1.S1_at	pmrna24173	hypothetical protein	-	2e-16	At4g10030	hydrolase, alpha/beta fold family protein	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)
0.55	82.2	0.95	Ptp.2246.1.A1_at	CK087617	-	-	3e-73	At1g01090	PDH-E1 ALPHA (PYRUVATE DEHYDROGENASE E1 ALPHA)	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)
0.50	78.6	0.95	PtpAffx.206853.1.S1_x_at	pmrna13617	hypothetical protein	-	2e-4	At5g10730	binding / catalytic/ coenzyme binding	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)
0.43	69.7	0.94	Ptp.78.3.A1_a_at	CV259205	-	-	9e-33	At1g30120	PDH-E1 BETA (PYRUVATE DEHYDROGENASE E1 BETA)	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)
0.40	67.0	0.95	PtpAffx.54493.1.S1_at	DN500707	-	-	2e-27	At3g13800	metallo-beta-lactamase family protein	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
4.8	96.4	GSM334224	Populus balsamifera_1006_mature_leaf_midday_1	GSE13990	Populus balsamifera developmental tissue series
4.4	95.9	GSM327659	Populus balsamifera_Male_Catkin_midday_1	GSE13990	Populus balsamifera developmental tissue series
3.7	94.7	GSM372099	Clone3200_LPI5_N+_8w_rep1	GSE14893	Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 3200
3.7	94.7	GSM327657	Populus balsamifera_Female_Catkin_midday_2	GSE13990	Populus balsamifera developmental tissue series
3.6	94.5	GSM327660	Populus balsamifera_Male_Catkin_midday_2	GSE13990	Populus balsamifera developmental tissue series
3.5	94.3	GSM327656	Populus balsamifera_Female_Catkin_midday_1	GSE13990	Populus balsamifera developmental tissue series
3.5	94.3	GSM327661	Populus balsamifera_Male_Catkin_midday_3	GSE13990	Populus balsamifera developmental tissue series
2.9	92.5	GSM362885	Clone1979_LPI2_N-_4w_rep1	GSE14515	Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 1979
2.7	91.8	GSM327658	Populus balsamifera_Female_Catkin_midday_3	GSE13990	Populus balsamifera developmental tissue series
2.6	91.3	GSM372096	Clone3200_LPI5_N-_4w_rep2	GSE14893	Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 3200

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Triticum_aestivum

Vitis_vinifera

Zea_mays

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