Co-expression analysis

Gene ID	Ptp.6857.2.S1_s_at
Gene name	hypothetical protein
Homology with Arabidopsis	Similar to At4g35620: CYCB2 (HF=1e-1)
Module size	12 genes
NF	0.73
%ile	97.3

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.77	94.9	0.94	Ptp.6857.2.S1_s_at	CA923790	hypothetical protein	-	1e-1	At4g35620	CYCB2	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)
0.82	96.3	0.93	PtpAffx.2265.10.A1_a_at	CV246443	hypothetical protein	-	2e-4	At1g20693	HMGB2 (HIGH MOBILITY GROUP B 2)	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)
0.81	96.1	0.94	PtpAffx.86796.1.A1_at	DN490220	hypothetical protein	-	1e-14	At2g26180	IQD6 (IQ-domain 6)	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)
0.76	94.3	0.94	PtpAffx.210026.1.S1_at	pmrna19760	hypothetical protein	-	1e-4	At4g38070	bHLH family protein	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)
0.73	93.6	0.94	PtpAffx.128825.2.S1_a_at	CK096703	hypothetical protein	-	4e-7	At5g67270	ATEB1C (microtubule end binding protein 1)	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)
0.69	91.5	0.94	Ptp.4412.2.S1_s_at	CV237391	hypothetical protein	-	1e-57	At2g25880	AtAUR2 (AtAurora2)	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)
0.67	91.1	0.94	Ptp.759.1.S1_at	CV259673	tubulin alpha-7 chain	-	1e-82	At4g14960	TUA6	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)
0.67	91.1	0.94	PtpAffx.201265.1.S1_at	pmrna2509	hypothetical protein	-	5e-7	At3g20150	kinesin motor family protein	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)
0.67	91.1	0.94	Ptp.6857.1.S1_s_at	BU833205	hypothetical protein	-	6e-9	At1g20590	cyclin, putative	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)
0.67	91.1	0.95	PtpAffx.200879.1.S1_at	pmrna1723	hypothetical protein	-	2e-6	At2g26760	CYCB1	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)
0.62	87.2	0.94	PtpAffx.71284.1.S1_at	BU837413	hypothetical protein	-	4e-1	At5g47220	ERF2 (ETHYLENE RESPONSIVE ELEMENT BINDING FACTOR 2)	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)
0.61	87.0	0.94	PtpAffx.202854.1.S1_s_at	pmrna5645	hypothetical protein	-	3e-12	At1g17480	IQD7 (IQ-domain 7)	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
3.8	94.9	GSM327660	Populus balsamifera_Male_Catkin_midday_2	GSE13990	Populus balsamifera developmental tissue series
3.5	94.3	GSM327405	Populus balsamifera_1006_young_leaf_midday_2	GSE13990	Populus balsamifera developmental tissue series
3.4	94.0	GSM327661	Populus balsamifera_Male_Catkin_midday_3	GSE13990	Populus balsamifera developmental tissue series
3.0	92.9	GSM327659	Populus balsamifera_Male_Catkin_midday_1	GSE13990	Populus balsamifera developmental tissue series
2.9	92.5	GSM334224	Populus balsamifera_1006_mature_leaf_midday_1	GSE13990	Populus balsamifera developmental tissue series
2.8	92.1	GSM327656	Populus balsamifera_Female_Catkin_midday_1	GSE13990	Populus balsamifera developmental tissue series
2.6	91.3	GSM327404	Populus balsamifera_1006_young_leaf_midday_1	GSE13990	Populus balsamifera developmental tissue series
2.5	90.9	GSM328566	Populus x canescens root hypoxia_rep_08	GSE13109	Effect of hypoxia on gene expression in Grey poplar
2.4	90.4	GSM328563	Populus x canescens root hypoxia_rep_05	GSE13109	Effect of hypoxia on gene expression in Grey poplar
2.1	88.6	GSM327658	Populus balsamifera_Female_Catkin_midday_3	GSE13990	Populus balsamifera developmental tissue series

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Triticum_aestivum

Vitis_vinifera

Zea_mays

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