Co-expression analysis

Gene ID	Ptp.6795.1.S1_at
Gene name	hypothetical protein
Homology with Arabidopsis	Similar to At1g75310: AUL1 (HF=5e-7)
Module size	7 genes
NF	0.24
%ile	44.2

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.63	88.1	0.94	Ptp.6795.1.S1_at	DN489696	hypothetical protein	-	5e-7	At1g75310	AUL1	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)
0.44	71.9	0.95	PtpAffx.15957.2.S1_at	CK318435	hypothetical protein	-	2e+0	At1g16740	ribosomal protein L20 family protein	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)
0.30	52.0	0.94	PtpAffx.24277.1.A1_at	CV265969	hypothetical protein	-	3e-3	At5g49700	DNA-binding protein-related	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)
0.21	36.5	0.94	PtpAffx.105803.2.S1_a_at	CV225405	hypothetical protein	-	7e-14	At2g35110	GRL (GNARLED)	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)
0.20	34.6	0.94	PtpAffx.45820.1.A1_s_at	CK093458	hypothetical protein	-	4e-1	At4g28040	nodulin MtN21 family protein	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)
0.19	32.7	0.94	Ptp.3679.1.S1_s_at	CK092681	hypothetical protein	-	6e-1	At2g18328	ATRL4 (ARABIDOPSIS RAD-LIKE 4)	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)
0.16	26.9	0.94	PtpAffx.8725.2.A1_at	CV232347	hypothetical protein	-	2e+1	At5g40530	-	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
7.6	98.3	GSM327404	Populus balsamifera_1006_young_leaf_midday_1	GSE13990	Populus balsamifera developmental tissue series
4.7	96.3	GSM327661	Populus balsamifera_Male_Catkin_midday_3	GSE13990	Populus balsamifera developmental tissue series
4.1	95.5	GSM327406	Populus balsamifera_1006_young_leaf_midday_3	GSE13990	Populus balsamifera developmental tissue series
3.1	93.2	GSM327413	Populus balsamifera_1006_differentiating_xylem_midday_3	GSE13990	Populus balsamifera developmental tissue series
3.1	93.2	GSM372090	Clone3200_LPI2_N+_4w_rep2	GSE14893	Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 3200
3.0	92.9	GSM327405	Populus balsamifera_1006_young_leaf_midday_2	GSE13990	Populus balsamifera developmental tissue series
3.0	92.9	GSM362886	Clone1979_LPI2_N-_4w_rep2	GSE14515	Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 1979
2.9	92.5	GSM327411	Populus balsamifera_1006_differentiating_xylem_midday_1	GSE13990	Populus balsamifera developmental tissue series
2.7	91.8	GSM362888	Clone1979_LPI5_N+_4w_rep2	GSE14515	Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 1979
2.3	89.8	GSM372093	Clone3200_LPI5_N+_4w_rep1	GSE14893	Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 3200

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Triticum_aestivum

Vitis_vinifera

Zea_mays

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