Co-expression analysis

Gene ID Ptp.6681.1.S1_at
Gene name hypothetical protein
Homology with ArabidopsisSimilar to At1g73010: phosphatase (HF=4e-14)
Module size 12 genes
NF 0.33
%ile 58.5

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.6086.00.89Ptp.6681.1.S1_atBI125981hypothetical protein-4e-14At1g73010phosphataseO.I.H.G.S.X.
0.5380.50.92Ptp.3545.1.S1_atCF235856--3e-1At3g44704unknown proteinO.I.H.G.S.X.
0.5078.60.93Ptp.7058.1.S1_atDN487866hypothetical protein-1e-4At3g27050unknown proteinO.I.H.G.S.X.
0.4673.70.92Ptp.2190.1.S1_atBU867120hypothetical protein-9e-15At2g29260tropinone reductase, putative / tropine dehydrogenase, putativeO.I.H.G.S.X.
0.4471.90.93Ptp.3207.1.S1_atCK093422hypothetical protein-7e-13At2g35680dual specificity protein phosphatase family proteinO.I.H.G.S.X.
0.3357.50.93Ptp.2417.1.S1_atCK093208--2e+0At5g22430unknown proteinO.I.H.G.S.X.
0.3052.00.93PtpAffx.72203.1.S1_atCF233869hypothetical protein-4e-8At5g12310zinc finger (C3HC4-type RING finger) family proteinO.I.H.G.S.X.
0.3052.00.94Ptp.2929.1.S1_atBU835620hypothetical protein-8e+0At5g44580unknown proteinO.I.H.G.S.X.
0.2747.10.94Ptp.3991.1.S1_atDN488960--7e-81At5g19050unknown proteinO.I.H.G.S.X.
0.2543.60.94PtpAffx.66816.1.S1_atCV271732hypothetical protein-3e-11At5g63060transporterO.I.H.G.S.X.
0.2136.50.92PtpAffx.157089.1.S1_atCK107215hypothetical protein-4e-5At3g17380meprin and TRAF homology domain-containing protein / MATH domain-containing proteinO.I.H.G.S.X.
0.2136.50.92PtpAffx.78779.1.S1_atBU885301--8e-2At5g43410ethylene-responsive factor, putativeO.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
3.594.3GSM328562Populus x canescens root hypoxia_rep_04GSE13109Effect of hypoxia on gene expression in Grey poplarLink to GEO
2.992.5GSM327661Populus balsamifera_Male_Catkin_midday_3GSE13990Populus balsamifera developmental tissue seriesLink to GEO
2.691.3GSM328564Populus x canescens root hypoxia_rep_06GSE13109Effect of hypoxia on gene expression in Grey poplarLink to GEO
2.289.3GSM328565Populus x canescens root hypoxia_rep_07GSE13109Effect of hypoxia on gene expression in Grey poplarLink to GEO
2.088.0GSM327407Populus balsamifera_1006_root_midday_1GSE13990Populus balsamifera developmental tissue seriesLink to GEO
2.088.0GSM327660Populus balsamifera_Male_Catkin_midday_2GSE13990Populus balsamifera developmental tissue seriesLink to GEO
2.088.0GSM327409Populus balsamifera_1006_root_midday_3GSE13990Populus balsamifera developmental tissue seriesLink to GEO
1.987.2GSM327408Populus balsamifera_1006_root_midday_2GSE13990Populus balsamifera developmental tissue seriesLink to GEO
1.987.2GSM328567Populus x canescens root hypoxia_rep_09GSE13109Effect of hypoxia on gene expression in Grey poplarLink to GEO
1.987.2GSM328560Populus x canescens root control_rep_11GSE13109Effect of hypoxia on gene expression in Grey poplarLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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