Co-expression analysis

Gene ID Ptp.644.1.S1_at
Gene name phenylcoumaran benzylic ether reductase -like protein
Homology with ArabidopsisSimilar to At4g13660: PRR2 (PINORESINOL REDUCTASE 2) (HF=4e-8)
Module size 18 genes
NF 0.39
%ile 66.0

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.7694.30.93Ptp.644.1.S1_atCV228278phenylcoumaran benzylic ether reductase -like protein-4e-8At4g13660PRR2 (PINORESINOL REDUCTASE 2)O.I.H.G.S.X.
0.5380.50.95PtpAffx.15908.1.S1_atCV231912hypothetical protein-2e-3At5g61750cupin family proteinO.I.H.G.S.X.
0.5178.90.96PtpAffx.1704.2.S1_s_atCK088122hypothetical protein-3e-5At1g28400unknown proteinO.I.H.G.S.X.
0.4975.70.96Ptp.1829.1.S1_s_atCK093207hypothetical protein-3e-7At1g62290aspartyl protease family proteinO.I.H.G.S.X.
0.4572.30.95PtpAffx.61213.2.A1_s_atDN489584hypothetical protein-9e-13At5g39380calmodulin-binding protein-relatedO.I.H.G.S.X.
0.4471.90.97PtpAffx.72296.1.S1_s_atCV275631hypothetical protein-9e-49At1g20090ROP2 (RHO-RELATED PROTEIN FROM PLANTS 2)O.I.H.G.S.X.
0.4369.70.96Ptp.5829.1.S1_atCK089302--7e-9At2g27740unknown proteinO.I.H.G.S.X.
0.3863.70.96PtpAffx.5888.2.A1_atCV236891hypothetical protein-9e-53At5g03300ADK2 (ADENOSINE KINASE 2)O.I.H.G.S.X.
0.3762.30.95PtpAffx.77994.1.S1_s_atCV130536hypothetical protein-1e-13At5g07450CYCP4O.I.H.G.S.X.
0.3661.60.97PtpAffx.15627.2.S1_s_atCK102877NAC domain protein, IPR003441-2e-12At4g28500ANAC073 (ARABIDOPSIS NAC DOMAIN CONTAINING PROTEIN 73)O.I.H.G.S.X.
0.3458.30.96PtpAffx.139530.1.S1_s_atAY479970.1hypothetical protein-2e-7At1g20700WOX14 (WUSCHEL RELATED HOMEOBOX 14)O.I.H.G.S.X.
0.3357.50.96Ptp.3494.1.S1_atDN492647--2e-10At1g07120-O.I.H.G.S.X.
0.3153.70.95Ptp.6561.1.S1_atCF235023hypothetical protein-6e-7At5g01360-O.I.H.G.S.X.
0.3153.70.97PtpAffx.102316.1.S1_a_atAI166956hypothetical protein-1e+0At4g02160unknown proteinO.I.H.G.S.X.
0.2645.20.98PtpAffx.148282.1.S1_s_atAJ779144tubulin alpha-1 chain-1e-135At1g04820TUA4O.I.H.G.S.X.
0.2645.20.95PtpAffx.7536.1.S1_atCN549424hypothetical protein-1e-25At4g05190ATK5 (ARABIDOPSIS THALIANA KINESIN 5)O.I.H.G.S.X.
0.2543.60.95PtpAffx.42709.1.A1_atCV226882hypothetical protein-2e+0At3g50100SDN1 (SMALL RNA DEGRADING NUCLEASE 1)O.I.H.G.S.X.
0.2238.30.96PtpAffx.13929.1.A1_atCV231650calcium dependent protein kinase 14-6e-21At5g12480CPK7 (calmodulin-domain protein kinase 7)O.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
8.198.5GSM327411Populus balsamifera_1006_differentiating_xylem_midday_1GSE13990Populus balsamifera developmental tissue seriesLink to GEO
6.097.5GSM327412Populus balsamifera_1006_differentiating_xylem_midday_2GSE13990Populus balsamifera developmental tissue seriesLink to GEO
5.897.4GSM327413Populus balsamifera_1006_differentiating_xylem_midday_3GSE13990Populus balsamifera developmental tissue seriesLink to GEO
3.293.5GSM327661Populus balsamifera_Male_Catkin_midday_3GSE13990Populus balsamifera developmental tissue seriesLink to GEO
2.590.9GSM328285Populus x canescens root control_rep_04GSE13109Effect of hypoxia on gene expression in Grey poplarLink to GEO
1.785.5GSM327404Populus balsamifera_1006_young_leaf_midday_1GSE13990Populus balsamifera developmental tissue seriesLink to GEO
1.785.5GSM328560Populus x canescens root control_rep_11GSE13109Effect of hypoxia on gene expression in Grey poplarLink to GEO
1.785.5GSM328284Populus x canescens root control_rep_03GSE13109Effect of hypoxia on gene expression in Grey poplarLink to GEO
1.482.3GSM136938Poplar contacted with P. aeruginosa PAO1 in 1 x hrp + 0.25 % sucroseGSE5887Pseudomonas aeruginosa PAO1 virulent genes in the poplar rhizosphereLink to GEO
1.482.3GSM328558Populus x canescens root control_rep_09GSE13109Effect of hypoxia on gene expression in Grey poplarLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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