Co-expression analysis

Gene ID Ptp.640.1.S1_s_at
Gene name hypothetical protein
Homology with ArabidopsisSimilar to At2g06050: OPR3 (OPDA-REDUCTASE 3) (HF=1e-21)
Module size 6 genes
NF 0.44
%ile 72.9

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.5784.20.94Ptp.640.1.S1_s_atCX186020hypothetical protein-1e-21At2g06050OPR3 (OPDA-REDUCTASE 3)O.I.H.G.S.X.
0.6187.00.95PtpAffx.224310.1.S1_atpmrna42743hypothetical protein-1e-53At1g63700YDA (YODA)O.I.H.G.S.X.
0.5984.90.95PtpAffx.96723.1.S1_atCN518261hypothetical protein-2e-27At1g09010glycoside hydrolase family 2 proteinO.I.H.G.S.X.
0.5380.50.95PtpAffx.123365.1.S1_s_atBI139210hypothetical protein-3e-36At1g11910aspartyl protease family proteinO.I.H.G.S.X.
0.4471.90.95PtpAffx.145508.1.S1_atCN549687outward rectifying potassium channel-3e-4At5g55630ATKCO1O.I.H.G.S.X.
0.2136.50.94PtpAffx.212243.1.S1_atpmrna24003hypothetical protein-1e-26At4g08580-O.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
5.196.8GSM327411Populus balsamifera_1006_differentiating_xylem_midday_1GSE13990Populus balsamifera developmental tissue seriesLink to GEO
4.395.8GSM327413Populus balsamifera_1006_differentiating_xylem_midday_3GSE13990Populus balsamifera developmental tissue seriesLink to GEO
4.195.5GSM327412Populus balsamifera_1006_differentiating_xylem_midday_2GSE13990Populus balsamifera developmental tissue seriesLink to GEO
2.892.1GSM328285Populus x canescens root control_rep_04GSE13109Effect of hypoxia on gene expression in Grey poplarLink to GEO
2.892.1GSM328560Populus x canescens root control_rep_11GSE13109Effect of hypoxia on gene expression in Grey poplarLink to GEO
2.791.8GSM328558Populus x canescens root control_rep_09GSE13109Effect of hypoxia on gene expression in Grey poplarLink to GEO
2.691.3GSM334224Populus balsamifera_1006_mature_leaf_midday_1GSE13990Populus balsamifera developmental tissue seriesLink to GEO
1.987.2GSM328566Populus x canescens root hypoxia_rep_08GSE13109Effect of hypoxia on gene expression in Grey poplarLink to GEO
1.987.2GSM328561Populus x canescens root control_rep_12GSE13109Effect of hypoxia on gene expression in Grey poplarLink to GEO
1.886.4GSM328277Populus x canescens root control_rep_01GSE13109Effect of hypoxia on gene expression in Grey poplarLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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