Co-expression analysis

Gene ID Ptp.6116.1.S1_at
Gene name cytochrome P450 /// cytochrome P450
Homology with ArabidopsisSimilar to At4g31500: CYP83B1 (CYTOCHROME P450 MONOOXYGENASE 83B1) (HF=2e-3)
Module size 30 genes
NF 0.34
%ile 59.4

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.7895.10.84Ptp.6116.1.S1_atBU811435cytochrome P450 /// cytochrome P450-2e-3At4g31500CYP83B1 (CYTOCHROME P450 MONOOXYGENASE 83B1)O.I.H.G.S.X.
0.5279.40.90PtpAffx.5866.1.A1_a_atCF236149hypothetical protein-1e+0At1g72370P40O.I.H.G.S.X.
0.4975.70.89PtpAffx.214335.1.S1_atpmrna27877hypothetical protein-7e-3At4g18830OFP5 (ARABIDOPSIS THALIANA OVATE FAMILY PROTEIN 5)O.I.H.G.S.X.
0.4875.40.91Ptp.6471.1.S1_atCN549809--2e-9At1g09610unknown proteinO.I.H.G.S.X.
0.4774.60.90Ptp.1350.1.S1_atCK093316hypothetical protein-3e-2At3g59350serine/threonine protein kinase, putativeO.I.H.G.S.X.
0.4471.90.90Ptp.2707.1.S1_atBU826219hypothetical protein-1e-1At1g78520-O.I.H.G.S.X.
0.4369.70.90Ptp.2973.1.S1_atDN488249hypothetical protein-3e-21At4g03230ATP binding / kinase/ protein kinase/ protein serine/threonine kinase/ protein tyrosine kinase/ sugar bindingO.I.H.G.S.X.
0.4167.70.90PtpAffx.205796.1.S1_atpmrna11458hypothetical protein-5e-2At1g19715jacalin lectin family proteinO.I.H.G.S.X.
0.4167.70.91PtpAffx.105282.1.S1_atCK107491hypothetical protein-3e-1At3g26110-O.I.H.G.S.X.
0.4067.00.88Ptp.6755.1.S1_x_atAY378090.1hypothetical protein-6e-1At5g46700TRN2 (TORNADO 2)O.I.H.G.S.X.
0.3964.60.88PtpAffx.56138.1.A1_atCV258067hypothetical protein-6e+0At5g61030GR-RBP3 (glycine-rich RNA-binding protein 3)O.I.H.G.S.X.
0.3964.60.92Ptp.789.1.S1_atCK089311hypothetical protein-8e-8At2g41820leucine-rich repeat transmembrane protein kinase, putativeO.I.H.G.S.X.
0.3964.60.89Ptp.6334.1.S1_atCN549485--3e-12At2g36570leucine-rich repeat transmembrane protein kinase, putativeO.I.H.G.S.X.
0.3964.60.90PtpAffx.201157.1.S1_s_atpmrna2271hypothetical protein-9e-2At3g19370-O.I.H.G.S.X.
0.3863.70.90Ptp.4669.1.S1_atCK088332--8e-13At3g53190pectate lyase family proteinO.I.H.G.S.X.
0.3863.70.93PtpAffx.73634.1.S1_s_atDN502654hypothetical protein-6e-55At2g47500ATP binding / microtubule motorO.I.H.G.S.X.
0.3762.30.88PtpAffx.221146.1.S1_atpmrna37783--8e-7At5g25180CYP71B14O.I.H.G.S.X.
0.3661.60.90Ptp.7277.1.S1_atBU896280hypothetical protein-4e-1At3g24068-O.I.H.G.S.X.
0.3357.50.92PtpAffx.92908.1.S1_atCK097943AP2 domain-containing transcription factor-2e-9At4g37750ANT (AINTEGUMENTA)O.I.H.G.S.X.
0.2950.50.88PtpAffx.20327.1.A1_atCK090438hypothetical protein-3e+0At5g02120OHP (ONE HELIX PROTEIN)O.I.H.G.S.X.
0.2950.50.89PtpAffx.102970.1.A1_atCN549756hypothetical protein-3e-14At4g30520leucine-rich repeat family protein / protein kinase family proteinO.I.H.G.S.X.
0.2850.50.90PtpAffx.54313.2.S1_a_atBU895504--6e-4At2g34790MEE23 (MATERNAL EFFECT EMBRYO ARREST 23)O.I.H.G.S.X.
0.2850.50.91PtpAffx.203260.1.S1_atpmrna6454hypothetical protein-2e-19At1g63820-O.I.H.G.S.X.
0.2747.10.91Ptp.1274.1.S1_s_atAF190881.1auxin efflux carrier component-3e-23At1g73590PIN1 (PIN-FORMED 1)O.I.H.G.S.X.
0.2543.60.91PtpAffx.39559.1.S1_atCF237196hypothetical protein-3e+0At3g45460zinc ion bindingO.I.H.G.S.X.
0.2441.80.91Ptp.7764.1.S1_atDN489656hypothetical protein-5e+0At5g49170unknown proteinO.I.H.G.S.X.
0.2441.80.91PtpAffx.135854.1.S1_atAJ768484hypothetical protein-8e-6At2g41870remorin family proteinO.I.H.G.S.X.
0.2136.50.93Ptp.478.1.A1_atCK087253hypothetical protein-4e-1At4g25410DNA binding / transcription factorO.I.H.G.S.X.
0.1830.80.89PtpAffx.221283.1.S1_atpmrna38056hypothetical protein-1e-5At1g71870MATE efflux family proteinO.I.H.G.S.X.
0.1423.50.89Ptp.6863.1.S1_atCV276110hypothetical protein-7e+0At5g67490unknown proteinO.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
3.894.9GSM327411Populus balsamifera_1006_differentiating_xylem_midday_1GSE13990Populus balsamifera developmental tissue seriesLink to GEO
3.393.7GSM327413Populus balsamifera_1006_differentiating_xylem_midday_3GSE13990Populus balsamifera developmental tissue seriesLink to GEO
2.590.9GSM327412Populus balsamifera_1006_differentiating_xylem_midday_2GSE13990Populus balsamifera developmental tissue seriesLink to GEO
2.490.4GSM327408Populus balsamifera_1006_root_midday_2GSE13990Populus balsamifera developmental tissue seriesLink to GEO
2.389.8GSM327661Populus balsamifera_Male_Catkin_midday_3GSE13990Populus balsamifera developmental tissue seriesLink to GEO
2.289.3GSM328557Populus x canescens root control_rep_08GSE13109Effect of hypoxia on gene expression in Grey poplarLink to GEO
2.188.6GSM328534Populus x canescens root control_rep_07GSE13109Effect of hypoxia on gene expression in Grey poplarLink to GEO
2.088.0GSM327657Populus balsamifera_Female_Catkin_midday_2GSE13990Populus balsamifera developmental tissue seriesLink to GEO
1.886.4GSM328564Populus x canescens root hypoxia_rep_06GSE13109Effect of hypoxia on gene expression in Grey poplarLink to GEO
1.886.4GSM328567Populus x canescens root hypoxia_rep_09GSE13109Effect of hypoxia on gene expression in Grey poplarLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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