Co-expression analysis

Gene ID	Ptp.5638.1.S1_at
Gene name	hypothetical protein
Homology with Arabidopsis	Similar to At1g76310: CYCB2 (HF=6e-14)
Module size	6 genes
NF	0.67
%ile	94.8

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.91	99.2	0.95	Ptp.5638.1.S1_at	DN489006	hypothetical protein	-	6e-14	At1g76310	CYCB2	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)
0.61	87.0	0.95	PtpAffx.20278.2.A1_s_at	CV244932	hypothetical protein	-	3e-20	At4g28950	ROP9 (RHO-RELATED PROTEIN FROM PLANTS 9)	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)
0.57	84.2	0.95	PtpAffx.2045.1.S1_at	CK093245	hypothetical protein	-	5e-20	At1g08560	SYP111 (SYNTAXIN OF PLANTS 111)	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)
0.55	82.2	0.95	Ptp.759.1.S1_at	CV259673	tubulin alpha-7 chain	-	1e-82	At4g14960	TUA6	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)
0.55	82.2	0.95	PtpAffx.200879.1.S1_at	pmrna1723	hypothetical protein	-	2e-6	At2g26760	CYCB1	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)
0.44	71.9	0.95	PtpAffx.129586.1.S1_at	CK088399	hypothetical protein	-	6e-11	At4g35620	CYCB2	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
6.1	97.6	GSM327660	Populus balsamifera_Male_Catkin_midday_2	GSE13990	Populus balsamifera developmental tissue series
5.7	97.3	GSM327661	Populus balsamifera_Male_Catkin_midday_3	GSE13990	Populus balsamifera developmental tissue series
2.7	91.8	GSM327404	Populus balsamifera_1006_young_leaf_midday_1	GSE13990	Populus balsamifera developmental tissue series
2.5	90.9	GSM327656	Populus balsamifera_Female_Catkin_midday_1	GSE13990	Populus balsamifera developmental tissue series
2.4	90.4	GSM372096	Clone3200_LPI5_N-_4w_rep2	GSE14893	Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 3200
2.2	89.3	GSM334226	Populus balsamifera_1006_mature_leaf_midday_3	GSE13990	Populus balsamifera developmental tissue series
2.2	89.3	GSM327659	Populus balsamifera_Male_Catkin_midday_1	GSE13990	Populus balsamifera developmental tissue series
2.0	88.0	GSM334225	Populus balsamifera_1006_mature_leaf_midday_2	GSE13990	Populus balsamifera developmental tissue series
2.0	88.0	GSM328066	Populus x canescens leaf control_rep_04	GSE13109	Effect of hypoxia on gene expression in Grey poplar
1.9	87.2	GSM328062	Populus x canescens leaf control_rep_02	GSE13109	Effect of hypoxia on gene expression in Grey poplar

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Triticum_aestivum

Vitis_vinifera

Zea_mays

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