| Gene ID | Ptp.5593.1.S1_at |
| Gene name | hypothetical protein |
| Homology with Arabidopsis | Similar to At4g26240: unknown protein (HF=7e-15) |
| Module size | 6 genes |
| NF | 0.53 |
| %ile | 83.5 |
| VF | %ile | CC | Gene ID | Repr. ID | Gene name | Func. | Ev | AGI code | Arabidopsis gene name | O.I. | H.G. | S.X. | Other DB |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 0.35 | 59.7 | 0.96 | Ptp.5593.1.S1_at | DN495608 | hypothetical protein | - | 7e-15 | At4g26240 | unknown protein | O.I. | H.G. | S.X. | |
| 0.80 | 96.0 | 0.96 | Ptp.7787.1.S1_s_at | DN499212 | - | - | 4e+0 | At2g05642 | - | O.I. | H.G. | S.X. | |
| 0.60 | 86.0 | 0.96 | PtpAffx.135882.1.A1_at | CV281275 | hypothetical protein | - | 1e-7 | At1g78420 | protein binding / zinc ion binding | O.I. | H.G. | S.X. | |
| 0.46 | 73.7 | 0.96 | Ptp.2558.1.S1_at | CK096344 | hypothetical protein | - | 0 | At1g78900 | VHA-A (VACUOLAR ATP SYNTHASE SUBUNIT A) | O.I. | H.G. | S.X. | |
| 0.44 | 71.9 | 0.96 | PtpAffx.12253.1.A1_at | CV225881 | hypothetical protein | - | 3e+0 | At4g32960 | unknown protein | O.I. | H.G. | S.X. | |
| 0.43 | 69.7 | 0.96 | PtpAffx.25116.1.A1_at | CV228813 | hypothetical protein | - | 2e-8 | At3g54130 | josephin family protein | O.I. | H.G. | S.X. |
| Std2 GX | %ile | GSM ID | Assay name | GSE ID | Experiment title | Link to GEO |
|---|---|---|---|---|---|---|
| 4.7 | 96.3 | GSM328564 | Populus x canescens root hypoxia_rep_06 | GSE13109 | Effect of hypoxia on gene expression in Grey poplar | |
| 4.7 | 96.3 | GSM136938 | Poplar contacted with P. aeruginosa PAO1 in 1 x hrp + 0.25 % sucrose | GSE5887 | Pseudomonas aeruginosa PAO1 virulent genes in the poplar rhizosphere | |
| 3.6 | 94.5 | GSM328567 | Populus x canescens root hypoxia_rep_09 | GSE13109 | Effect of hypoxia on gene expression in Grey poplar | |
| 3.3 | 93.7 | GSM328565 | Populus x canescens root hypoxia_rep_07 | GSE13109 | Effect of hypoxia on gene expression in Grey poplar | |
| 2.5 | 90.9 | GSM327411 | Populus balsamifera_1006_differentiating_xylem_midday_1 | GSE13990 | Populus balsamifera developmental tissue series | |
| 2.3 | 89.8 | GSM362888 | Clone1979_LPI5_N+_4w_rep2 | GSE14515 | Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 1979 | |
| 1.8 | 86.4 | GSM327412 | Populus balsamifera_1006_differentiating_xylem_midday_2 | GSE13990 | Populus balsamifera developmental tissue series | |
| 1.6 | 84.5 | GSM136936 | Poplar in 1 x hrp + 0.25 % sucrose no bacteria | GSE5887 | Pseudomonas aeruginosa PAO1 virulent genes in the poplar rhizosphere | |
| 1.4 | 82.3 | GSM244438 | Mmd infected tissue, biological rep3 | GSE9673 | Comparative transcriptomic reveals signatures specific to various interactions with Melampsora rust fungi | |
| 1.4 | 82.3 | GSM244431 | non infected tissue, biological rep2 | GSE9673 | Comparative transcriptomic reveals signatures specific to various interactions with Melampsora rust fungi | |
| VF | %ile | Gene ID | Repr. ID | Gene Name | Func. | Ev | AGI code | Arabidopsis gene name | O.I. | H.G. | S.X. | Other DB |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 0.80 | 94.0 | Zm.1437.1.A1_at | At4g26240 | hypothetical protein LOC100193312 | - | 2e+0 | At4g01220 | - | O.I. | H.G. | S.X. | |
| 0.76 | 91.1 | Zm.19212.1.S1_at | At4g26240 | - | - | 1e-1 | At1g06160 | ORA59 (OCTADECANOID-RESPONSIVE ARABIDOPSIS AP2/ERF 59) | O.I. | H.G. | S.X. | |
| 0.53 | 69.1 | Zm.18946.1.A1_at | At4g26240 | hypothetical protein LOC100278262 | - | 1e+0 | At1g69660 | meprin and TRAF homology domain-containing protein / MATH domain-containing protein | O.I. | H.G. | S.X. | |
| 0.52 | 67.3 | Zm.9975.1.A1_at | At4g26240 | - | - | 7e-6 | At5g64200 | ATSC35 | O.I. | H.G. | S.X. | |
| 0.50 | 65.7 | Zm.15048.1.A1_at | At4g26240 | - | - | 5e+0 | At5g14750 | ATMYB66 (MYB DOMAIN PROTEIN 66) | O.I. | H.G. | S.X. | |
| 0.48 | 61.3 | Zm.4420.1.S1_at | At4g26240 | hypothetical protein LOC100273293 | - | 4e-15 | At3g13450 | DIN4 (DARK INDUCIBLE 4) | O.I. | H.G. | S.X. | |
| 0.46 | 58.4 | Zm.17192.1.A1_at | At4g26240 | - | - | 5e+0 | At2g22520 | unknown protein | O.I. | H.G. | S.X. | |
| 0.35 | 38.9 | Zm.9322.1.A1_at | At4g26240 | - | - | 6e+0 | At5g43070 | WPP1 (WPP domain protein 1) | O.I. | H.G. | S.X. | |
| 0.33 | 36.0 | Zm.3780.3.S1_at | At4g26240 | - | - | 2e+0 | At1g29720 | protein kinase family protein | O.I. | H.G. | S.X. |
| Arabidopsis_thaliana |
| Glycine_max |
| Hordeum_vulgare |
| Oryza_sativa |
| Triticum_aestivum |
| Vitis_vinifera |
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