| Gene ID | Ptp.5593.1.S1_at |
| Gene name | hypothetical protein |
| Homology with Arabidopsis | Similar to At4g26240: unknown protein (HF=7e-15) |
| Module size | 6 genes |
| NF | 0.53 |
| %ile | 83.5 |
| VF | %ile | CC | Gene ID | Repr. ID | Gene name | Func. | Ev | AGI code | Arabidopsis gene name | O.I. | H.G. | S.X. | Other DB |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 0.35 | 59.7 | 0.96 | Ptp.5593.1.S1_at | DN495608 | hypothetical protein | - | 7e-15 | At4g26240 | unknown protein | O.I. | H.G. | S.X. | |
| 0.80 | 96.0 | 0.96 | Ptp.7787.1.S1_s_at | DN499212 | - | - | 4e+0 | At2g05642 | - | O.I. | H.G. | S.X. | |
| 0.60 | 86.0 | 0.96 | PtpAffx.135882.1.A1_at | CV281275 | hypothetical protein | - | 1e-7 | At1g78420 | protein binding / zinc ion binding | O.I. | H.G. | S.X. | |
| 0.46 | 73.7 | 0.96 | Ptp.2558.1.S1_at | CK096344 | hypothetical protein | - | 0 | At1g78900 | VHA-A (VACUOLAR ATP SYNTHASE SUBUNIT A) | O.I. | H.G. | S.X. | |
| 0.44 | 71.9 | 0.96 | PtpAffx.12253.1.A1_at | CV225881 | hypothetical protein | - | 3e+0 | At4g32960 | unknown protein | O.I. | H.G. | S.X. | |
| 0.43 | 69.7 | 0.96 | PtpAffx.25116.1.A1_at | CV228813 | hypothetical protein | - | 2e-8 | At3g54130 | josephin family protein | O.I. | H.G. | S.X. |
| Std2 GX | %ile | GSM ID | Assay name | GSE ID | Experiment title | Link to GEO |
|---|---|---|---|---|---|---|
| 4.7 | 96.3 | GSM328564 | Populus x canescens root hypoxia_rep_06 | GSE13109 | Effect of hypoxia on gene expression in Grey poplar | |
| 4.7 | 96.3 | GSM136938 | Poplar contacted with P. aeruginosa PAO1 in 1 x hrp + 0.25 % sucrose | GSE5887 | Pseudomonas aeruginosa PAO1 virulent genes in the poplar rhizosphere | |
| 3.6 | 94.5 | GSM328567 | Populus x canescens root hypoxia_rep_09 | GSE13109 | Effect of hypoxia on gene expression in Grey poplar | |
| 3.3 | 93.7 | GSM328565 | Populus x canescens root hypoxia_rep_07 | GSE13109 | Effect of hypoxia on gene expression in Grey poplar | |
| 2.5 | 90.9 | GSM327411 | Populus balsamifera_1006_differentiating_xylem_midday_1 | GSE13990 | Populus balsamifera developmental tissue series | |
| 2.3 | 89.8 | GSM362888 | Clone1979_LPI5_N+_4w_rep2 | GSE14515 | Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 1979 | |
| 1.8 | 86.4 | GSM327412 | Populus balsamifera_1006_differentiating_xylem_midday_2 | GSE13990 | Populus balsamifera developmental tissue series | |
| 1.6 | 84.5 | GSM136936 | Poplar in 1 x hrp + 0.25 % sucrose no bacteria | GSE5887 | Pseudomonas aeruginosa PAO1 virulent genes in the poplar rhizosphere | |
| 1.4 | 82.3 | GSM244438 | Mmd infected tissue, biological rep3 | GSE9673 | Comparative transcriptomic reveals signatures specific to various interactions with Melampsora rust fungi | |
| 1.4 | 82.3 | GSM244431 | non infected tissue, biological rep2 | GSE9673 | Comparative transcriptomic reveals signatures specific to various interactions with Melampsora rust fungi | |
| VF | %ile | Gene ID | Repr. ID | Gene Name | Func. | Ev | AGI code | Arabidopsis gene name | O.I. | H.G. | S.X. | Other DB |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 0.78 | 93.4 | Os01g0559300 | At4g26240 | - | Conserved hypothetical protein | 1e-4 | At4g26240 | unknown protein | O.I. | H.G. | S.X. | |
| 0.56 | 76.3 | Os04g0465000 | At4g26240 | - | Sterile alpha motif SAM domain containing protein | 3e+0 | At3g48209 | - | O.I. | H.G. | S.X. | |
| 0.55 | 73.7 | Os03g0818000 | At4g26240 | - | Conserved hypothetical protein | 3e-16 | At5g22060 | ATJ2 | O.I. | H.G. | S.X. | |
| 0.47 | 62.3 | Os06g0485100 | At4g26240 | - | Conserved hypothetical protein | 2e-6 | At3g18380 | sequence-specific DNA binding / transcription factor | O.I. | H.G. | S.X. | |
| 0.44 | 58.1 | Os10g0324600 | At4g26240 | - | Zn-finger, U1-like domain containing protein | 2e-1 | At4g12540 | unknown protein | O.I. | H.G. | S.X. | |
| 0.42 | 53.9 | Os06g0713900 | At4g26240 | - | Hypothetical protein | 3e-2 | At2g35960 | NHL12 | O.I. | H.G. | S.X. | |
| 0.40 | 51.1 | Os03g0792500 | At4g26240 | - | MATH domain containing protein | 6e-5 | At5g21010 | ATBPM5 (BTB-POZ and MATH domain 5) | O.I. | H.G. | S.X. | |
| 0.38 | 46.9 | Os07g0175100 | At4g26240 | - | Bipartite response regulator, C-terminal effectordomain containing protein | 6e-2 | At3g63270 | unknown protein | O.I. | H.G. | S.X. | |
| 0.38 | 46.9 | Os02g0194000 | At4g26240 | - | Myb, DNA-binding domain containing protein | 7e-1 | At4g20300 | unknown protein | O.I. | H.G. | S.X. | |
| 0.38 | 46.9 | Os08g0427900 | At4g26240 | - | Hin19 (Fragment) | 5e-5 | At5g37720 | RNA and export factor-binding protein, putative | O.I. | H.G. | S.X. | |
| 0.36 | 44.0 | Os07g0103200 | At4g26240 | - | Conserved hypothetical protein | 8e-10 | At4g27120 | unknown protein | O.I. | H.G. | S.X. | |
| 0.36 | 44.0 | Os08g0295000 | At4g26240 | - | Conserved hypothetical protein | 5e-1 | At1g76065 | - | O.I. | H.G. | S.X. | |
| 0.33 | 38.8 | Os07g0101400 | At4g26240 | - | MATH domain containing protein | 4e-3 | At3g03740 | ATBPM4 (BTB-POZ and MATH domain 4) | O.I. | H.G. | S.X. | |
| 0.31 | 34.5 | Os08g0171100 | At4g26240 | - | AINTEGUMENTA-like protein | 2e-2 | At4g37750 | ANT (AINTEGUMENTA) | O.I. | H.G. | S.X. | |
| 0.30 | 32.7 | Os11g0483600 | At4g26240 | - | DNA-binding SAP domain containing protein | 8e+0 | At5g64160 | unknown protein | O.I. | H.G. | S.X. | |
| 0.27 | 27.5 | Os12g0638600 | At4g26240 | - | Hypothetical protein | 3e-4 | At5g20170 | unknown protein | O.I. | H.G. | S.X. | |
| 0.25 | 24.1 | Os04g0672200 | At4g26240 | - | Conserved hypothetical protein | 2e-3 | At2g01340 | unknown protein | O.I. | H.G. | S.X. | |
| 0.23 | 21.2 | Os06g0206100 | At4g26240 | - | Protein of unknown function DUF1296 family protein | 4e-4 | At3g13990 | unknown protein | O.I. | H.G. | S.X. | |
| 0.20 | 16.5 | Os02g0180100 | At4g26240 | - | Peptidase C12, ubiquitin carboxyl-terminalhydrolase 1 family protein | 8e-10 | At1g65650 | UCH2 | O.I. | H.G. | S.X. | |
| 0.17 | 12.6 | Os04g0401300 | At4g26240 | - | CBS domain containing protein | 1e-2 | At2g23320 | WRKY15 | O.I. | H.G. | S.X. |
| Arabidopsis_thaliana |
| Glycine_max |
| Hordeum_vulgare |
| Triticum_aestivum |
| Vitis_vinifera |
| Zea_mays |
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