Co-expression analysis

Gene ID Ptp.5398.1.S1_a_at
Gene name
Homology with ArabidopsisSimilar to At5g15080: protein kinase, putative (HF=2e-19)
Module size 8 genes
NF 0.11
%ile 22.0

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.7493.80.88Ptp.5398.1.S1_a_atCV233325--2e-19At5g15080protein kinase, putativeO.I.H.G.S.X.
0.2238.30.88Ptp.1650.1.A1_atCK092631--4e-2At3g58790GAUT15 (Galacturonosyltransferase 15)O.I.H.G.S.X.
0.2034.60.92PtpAffx.159951.1.A1_atCV254171hypothetical protein-3e-17At3g54810zinc finger (GATA type) family proteinO.I.H.G.S.X.
0.1016.30.90PtpAffx.95686.1.A1_atCV249172hypothetical protein-2e-22At2g31350GLX2-5 (GLYOXALASE 2-5)O.I.H.G.S.X.
0.1016.30.88PtpAffx.143826.1.S1_atDN494792hypothetical protein-7e-2At3g02440unknown proteinO.I.H.G.S.X.
0.0711.60.88PtpAffx.210974.1.S1_atpmrna21560hypothetical protein-3e-2At5g13860ELC-Like (ELCH-like)O.I.H.G.S.X.
0.0711.60.88PtpAffx.5982.1.S1_atCV226670--1e+0At4g08151unknown proteinO.I.H.G.S.X.
0.0711.60.90Ptp.1989.1.S1_atCK087714hypothetical protein-7e+0At4g13840transferase family proteinO.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
5.897.4GSM327412Populus balsamifera_1006_differentiating_xylem_midday_2GSE13990Populus balsamifera developmental tissue seriesLink to GEO
5.697.2GSM327411Populus balsamifera_1006_differentiating_xylem_midday_1GSE13990Populus balsamifera developmental tissue seriesLink to GEO
5.096.6GSM327403Populus balsamifera_20071015_Etiolated_seedling_6d_3GSE13990Populus balsamifera developmental tissue seriesLink to GEO
4.796.3GSM327400Populus balsamifera_20071015_Etiolated_seedling_6d_1GSE13990Populus balsamifera developmental tissue seriesLink to GEO
3.794.7GSM327413Populus balsamifera_1006_differentiating_xylem_midday_3GSE13990Populus balsamifera developmental tissue seriesLink to GEO
3.594.3GSM327402Populus balsamifera_20071015_Etiolated_seedling_6d_2GSE13990Populus balsamifera developmental tissue seriesLink to GEO
2.188.6GSM372042Clone1979_LPI5_N-_8w_rep1GSE14515Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 1979Link to GEO
2.088.0GSM327404Populus balsamifera_1006_young_leaf_midday_1GSE13990Populus balsamifera developmental tissue seriesLink to GEO
1.684.5GSM327397Populus balsamifera_20071015_Etiolated_seedling_6d_transfered_to_light_3h_2GSE13990Populus balsamifera developmental tissue seriesLink to GEO
1.583.5GSM334225Populus balsamifera_1006_mature_leaf_midday_2GSE13990Populus balsamifera developmental tissue seriesLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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