Co-expression analysis

Gene ID Ptp.5364.1.S1_s_at
Gene name hypothetical protein
Homology with ArabidopsisSimilar to At2g21140: ATPRP2 (PROLINE-RICH PROTEIN 2) (HF=1e-1)
Module size 6 genes
NF 0.33
%ile 58.0

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.7393.60.93Ptp.5364.1.S1_s_atCK100365hypothetical protein-1e-1At2g21140ATPRP2 (PROLINE-RICH PROTEIN 2)O.I.H.G.S.X.
0.5078.60.94PtpAffx.12219.1.S1_s_atDN493460hypothetical protein-8e-7At2g04570GDSL-motif lipase/hydrolase family proteinO.I.H.G.S.X.
0.3255.20.93PtpAffx.224655.1.S1_s_atpmrna43407hypothetical protein-8e-26At1g25450KCS5 (3-KETOACYL-COA SYNTHASE 5)O.I.H.G.S.X.
0.3153.70.95PtpAffx.78712.1.S1_a_atCV282607hypothetical protein-1e-1At3g29800AAA-type ATPase familyO.I.H.G.S.X.
0.2850.50.93PtpAffx.7804.3.A1_a_atCV237357hypothetical protein-4e-1At2g28755UDP-D-glucuronate carboxy-lyase-relatedO.I.H.G.S.X.
0.1423.50.94PtpAffx.30556.2.S1_s_atCV226345hypothetical protein-1e-19At1g55670PSAG (PHOTOSYSTEM I SUBUNIT G)O.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
5.196.8GSM327660Populus balsamifera_Male_Catkin_midday_2GSE13990Populus balsamifera developmental tissue seriesLink to GEO
4.996.5GSM327659Populus balsamifera_Male_Catkin_midday_1GSE13990Populus balsamifera developmental tissue seriesLink to GEO
4.395.8GSM327661Populus balsamifera_Male_Catkin_midday_3GSE13990Populus balsamifera developmental tissue seriesLink to GEO
3.794.7GSM334226Populus balsamifera_1006_mature_leaf_midday_3GSE13990Populus balsamifera developmental tissue seriesLink to GEO
3.393.7GSM362889Clone1979_LPI5_N-_4w_rep1GSE14515Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 1979Link to GEO
3.293.5GSM372095Clone3200_LPI5_N-_4w_rep1GSE14893Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 3200Link to GEO
3.193.2GSM327656Populus balsamifera_Female_Catkin_midday_1GSE13990Populus balsamifera developmental tissue seriesLink to GEO
3.193.2GSM372096Clone3200_LPI5_N-_4w_rep2GSE14893Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 3200Link to GEO
2.892.1GSM334225Populus balsamifera_1006_mature_leaf_midday_2GSE13990Populus balsamifera developmental tissue seriesLink to GEO
2.691.3GSM327657Populus balsamifera_Female_Catkin_midday_2GSE13990Populus balsamifera developmental tissue seriesLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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