Co-expression analysis

Gene ID Ptp.5109.1.S1_at
Gene name cytochrome P450 /// cytochrome P450 /// cytochrome P450
Homology with ArabidopsisSimilar to At3g44250: CYP71B38 (HF=6e-2)
Module size 21 genes
NF 0.59
%ile 89.4

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.7794.90.89Ptp.5109.1.S1_atBU810061cytochrome P450 /// cytochrome P450 /// cytochrome P450-6e-2At3g44250CYP71B38O.I.H.G.S.X.
0.8397.00.95Ptp.2385.1.S1_atBU886586hypothetical protein-2e-21At2g22830SQE2 (squalene epoxidase 2)O.I.H.G.S.X.
0.8196.10.94Ptp.497.1.S1_s_atCK087555--2e-1At1g19730ATTRX4O.I.H.G.S.X.
0.8196.10.94Ptp.888.1.S1_atCK100780hypothetical protein-3e+0At3g20557unknown proteinO.I.H.G.S.X.
0.7694.30.94Ptp.883.1.A1_atCK090129hypothetical protein-4e-1At3g28007nodulin MtN3 family proteinO.I.H.G.S.X.
0.7694.30.95Ptp.1037.1.S1_atCK090178beta-ketoacyl-coa synthase family protein /// beta-ketoacyl-coa synthase family protein-9e-4At1g07720KCS3 (3-KETOACYL-COA SYNTHASE 3)O.I.H.G.S.X.
0.7292.70.95Ptp.7656.1.S1_atDN498408hypothetical protein-1e-1At5g62130Per1-like protein-relatedO.I.H.G.S.X.
0.7091.70.92PtpAffx.106035.1.S1_atDN483857hypothetical protein-5e-1At5g57150basic helix-loop-helix (bHLH) family proteinO.I.H.G.S.X.
0.6388.10.92PtpAffx.8091.3.S1_atCF229967--4e+0At5g38060unknown proteinO.I.H.G.S.X.
0.6287.20.91Ptp.2249.1.A1_atCK090018hypothetical protein-8e-1At1g22470unknown proteinO.I.H.G.S.X.
0.6086.00.95Ptp.7888.1.S1_atDN500883hypothetical protein-6e-1At2g33590cinnamoyl-CoA reductase familyO.I.H.G.S.X.
0.5984.90.94PtpAffx.78712.2.S1_a_atBI068872hypothetical protein-1e+0At5g65390AGP7O.I.H.G.S.X.
0.5884.20.95Ptp.857.1.S1_atCK089982hypothetical protein-4e-1At1g62770invertase/pectin methylesterase inhibitor family proteinO.I.H.G.S.X.
0.5178.90.95Ptp.2264.1.S1_atCK089625hypothetical protein-3e-5At5g23530AtCXE18 (Arabidopsis thaliana carboxyesterase 18)O.I.H.G.S.X.
0.4673.70.96PtpAffx.61208.1.S1_atBU835871--4e-1At5g3553040S ribosomal protein S3 (RPS3C)O.I.H.G.S.X.
0.4471.90.94PtpAffx.77416.2.S1_atCK110402hypothetical protein-1e+1At5g37960oxidoreductase-relatedO.I.H.G.S.X.
0.4268.60.95Ptp.128.1.S1_atAJ306830.1hypothetical protein-3e-12At4g14550IAA14 (INDOLE-3-ACETIC ACID INDUCIBLE 14)O.I.H.G.S.X.
0.4167.70.95Ptp.6225.1.S1_atDN500518hypothetical protein-3e-2At1g22370AtUGT85A5 (UDP-glucosyl transferase 85A5)O.I.H.G.S.X.
0.4067.00.96Ptp.2527.1.S1_atBU811942hypothetical protein-4e+0At3g25545unknown proteinO.I.H.G.S.X.
0.3964.60.93Ptp.7826.1.S1_atDN499766--2e+0At5g18260protein binding / zinc ion bindingO.I.H.G.S.X.
0.3458.30.93PtpAffx.26369.3.S1_s_atCK104729hypothetical protein-2e+0At2g34160nucleic acid bindingO.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
3.694.5GSM328066Populus x canescens leaf control_rep_04GSE13109Effect of hypoxia on gene expression in Grey poplarLink to GEO
3.594.3GSM328105Populus x canescens leaf hypoxia_rep_01GSE13109Effect of hypoxia on gene expression in Grey poplarLink to GEO
2.892.1GSM328059Populus x canescens leaf control_rep_01GSE13109Effect of hypoxia on gene expression in Grey poplarLink to GEO
2.892.1GSM328063Populus x canescens leaf control_rep_03GSE13109Effect of hypoxia on gene expression in Grey poplarLink to GEO
2.490.4GSM328062Populus x canescens leaf control_rep_02GSE13109Effect of hypoxia on gene expression in Grey poplarLink to GEO
2.188.6GSM328077Populus x canescens leaf control_rep_06GSE13109Effect of hypoxia on gene expression in Grey poplarLink to GEO
2.088.0GSM328564Populus x canescens root hypoxia_rep_06GSE13109Effect of hypoxia on gene expression in Grey poplarLink to GEO
1.684.5GSM327660Populus balsamifera_Male_Catkin_midday_2GSE13990Populus balsamifera developmental tissue seriesLink to GEO
1.684.5GSM362889Clone1979_LPI5_N-_4w_rep1GSE14515Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 1979Link to GEO
1.684.5GSM372043Clone1979_LPI5_N-_8w_rep2GSE14515Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 1979Link to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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