Co-expression analysis

Gene ID Ptp.5049.2.S1_s_at
Gene name hypothetical protein
Homology with ArabidopsisSimilar to At5g59305: unknown protein (HF=5e+0)
Module size 19 genes
NF 0.43
%ile 71.7

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.9299.30.93Ptp.5049.2.S1_s_atBU888047hypothetical protein-5e+0At5g59305unknown proteinO.I.H.G.S.X.
0.7393.60.95PtpAffx.2363.1.A1_atCV232144hypothetical protein-6e-37At4g31750WIN2 (HOPW1-1-INTERACTING 2)O.I.H.G.S.X.
0.5582.20.94PtpAffx.210412.1.S1_atpmrna20460hypothetical protein-4e-11At1g73750-O.I.H.G.S.X.
0.5380.50.95PtpAffx.101699.1.A1_a_atCV241536--2e-7At5g16120hydrolase, alpha/beta fold family proteinO.I.H.G.S.X.
0.5078.60.95Ptp.7589.1.A1_a_atCV245534hypothetical protein-3e-51At1g32380ribose-phosphate pyrophosphokinase 2 / phosphoribosyl diphosphate synthetase 2 (PRS2)O.I.H.G.S.X.
0.4975.70.95PtpAffx.160545.1.A1_s_atDN492056glutathione peroxidase-3e-11At3g63080ATGPX5 (glutathione peroxidase 5)O.I.H.G.S.X.
0.4369.70.95PtpAffx.20679.2.S1_s_atCX169043hypothetical protein-2e-47At2g17800ARAC1O.I.H.G.S.X.
0.4268.60.94PtpAffx.13744.1.S1_a_atCV264383Ca2+ antiporter/cation exchanger-4e-27At3g13320CAX2 (CATION EXCHANGER 2)O.I.H.G.S.X.
0.4167.70.95PtpAffx.7974.1.S1_atCA924099hypothetical protein-5e-19At2g20900diacylglycerol kinase, putativeO.I.H.G.S.X.
0.4167.70.94PtpAffx.79508.1.S1_atDN492236hypothetical protein-4e-89At5g05920DHS (DEOXYHYPUSINE SYNTHASE)O.I.H.G.S.X.
0.4067.00.94PtpAffx.25383.2.A1_atCA823290hypothetical protein-2e-15At3g58040SINAT2 (SEVEN IN ABSENTIA OF ARABIDOPSIS 2)O.I.H.G.S.X.
0.3863.70.97PtpAffx.108502.1.A1_atBI127008hypothetical protein-8e-30At3g48030hypoxia-responsive family protein / zinc finger (C3HC4-type RING finger) family proteinO.I.H.G.S.X.
0.3863.70.95PtpAffx.4110.1.S1_a_atCV228849hypothetical protein-8e-71At4g17530ATRAB1CO.I.H.G.S.X.
0.3661.60.94PtpAffx.13744.1.S1_atCV264383Ca2+ antiporter/cation exchanger /// Ca2+ antiporter/cation exchanger-4e-27At3g13320CAX2 (CATION EXCHANGER 2)O.I.H.G.S.X.
0.3357.50.96PtpAffx.155063.1.S1_s_atCK111096hypothetical protein-5e-3At2g17280phosphoglycerate/bisphosphoglycerate mutase family proteinO.I.H.G.S.X.
0.3052.00.95PtpAffx.24901.1.A1_atCV242012hypothetical protein-6e-3At5g58390peroxidase, putativeO.I.H.G.S.X.
0.2950.50.94PtpAffx.152061.1.S1_s_atCK116361tubulin alpha-8 chain-6e-149At5g19780TUA5O.I.H.G.S.X.
0.2850.50.95Ptp.6262.1.S1_atCV268811hypothetical protein-4e-76At5g40650SDH2-2O.I.H.G.S.X.
0.2543.60.95Ptp.6508.1.S1_atCV259562hypothetical protein-2e-59At3g55530SDIR1 (SALT- AND DROUGHT-INDUCED RING FINGER1)O.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
4.395.8GSM327661Populus balsamifera_Male_Catkin_midday_3GSE13990Populus balsamifera developmental tissue seriesLink to GEO
3.794.7GSM327660Populus balsamifera_Male_Catkin_midday_2GSE13990Populus balsamifera developmental tissue seriesLink to GEO
3.393.7GSM327657Populus balsamifera_Female_Catkin_midday_2GSE13990Populus balsamifera developmental tissue seriesLink to GEO
3.293.5GSM327404Populus balsamifera_1006_young_leaf_midday_1GSE13990Populus balsamifera developmental tissue seriesLink to GEO
2.791.8GSM327659Populus balsamifera_Male_Catkin_midday_1GSE13990Populus balsamifera developmental tissue seriesLink to GEO
2.490.4GSM327656Populus balsamifera_Female_Catkin_midday_1GSE13990Populus balsamifera developmental tissue seriesLink to GEO
1.987.2GSM327411Populus balsamifera_1006_differentiating_xylem_midday_1GSE13990Populus balsamifera developmental tissue seriesLink to GEO
1.684.5GSM327658Populus balsamifera_Female_Catkin_midday_3GSE13990Populus balsamifera developmental tissue seriesLink to GEO
1.684.5GSM362888Clone1979_LPI5_N+_4w_rep2GSE14515Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 1979Link to GEO
1.684.5GSM136936Poplar in 1 x hrp + 0.25 % sucrose no bacteriaGSE5887Pseudomonas aeruginosa PAO1 virulent genes in the poplar rhizosphereLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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