Co-expression analysis

Gene ID Ptp.488.1.A1_at
Gene name hypothetical protein
Homology with ArabidopsisSimilar to At1g28630: unknown protein (HF=2e-1)
Module size 6 genes
NF 0.51
%ile 81.5

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.5582.20.92Ptp.488.1.A1_atCK087424hypothetical protein-2e-1At1g28630unknown proteinO.I.H.G.S.X.
0.5582.20.93Ptp.2625.1.S1_atCK093627hypothetical protein-7e+0At1g19180JAZ1 (JASMONATE-ZIM-DOMAIN PROTEIN 1)O.I.H.G.S.X.
0.4471.90.94Ptp.7152.1.A1_atDN488191hypothetical protein-4e-2At1g62530unknown proteinO.I.H.G.S.X.
0.4369.70.93PtpAffx.26991.1.S1_atDN487309hypothetical protein-3e-6At4g12000-O.I.H.G.S.X.
0.4369.70.93PtpAffx.8674.4.S1_atCV233756hypothetical protein-5e-7At2g33510protein bindingO.I.H.G.S.X.
0.4067.00.94Ptp.8005.1.S1_atDN503222hypothetical protein-4e-1At5g35180phosphoinositide bindingO.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
5.396.9GSM328062Populus x canescens leaf control_rep_02GSE13109Effect of hypoxia on gene expression in Grey poplarLink to GEO
2.791.8GSM328066Populus x canescens leaf control_rep_04GSE13109Effect of hypoxia on gene expression in Grey poplarLink to GEO
2.490.4GSM328274Populus x canescens leaf hypoxia_rep_02GSE13109Effect of hypoxia on gene expression in Grey poplarLink to GEO
2.289.3GSM328557Populus x canescens root control_rep_08GSE13109Effect of hypoxia on gene expression in Grey poplarLink to GEO
2.289.3GSM328275Populus x canescens leaf hypoxia_rep_03GSE13109Effect of hypoxia on gene expression in Grey poplarLink to GEO
2.188.6GSM327403Populus balsamifera_20071015_Etiolated_seedling_6d_3GSE13990Populus balsamifera developmental tissue seriesLink to GEO
2.188.6GSM328105Populus x canescens leaf hypoxia_rep_01GSE13109Effect of hypoxia on gene expression in Grey poplarLink to GEO
2.188.6GSM328284Populus x canescens root control_rep_03GSE13109Effect of hypoxia on gene expression in Grey poplarLink to GEO
2.088.0GSM328070Populus x canescens leaf control_rep_05GSE13109Effect of hypoxia on gene expression in Grey poplarLink to GEO
1.987.2GSM328077Populus x canescens leaf control_rep_06GSE13109Effect of hypoxia on gene expression in Grey poplarLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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